Logo
Information on SUBCLASS 5.78.1
Subclass Accession number: 4082
Subclass: 5.78.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 49379 (>50 %)  49384 (>50 %)  49390 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 22.9 +/- 32.6
Average RMSD (Å) : 0.633 +/- 0.231

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XpXpXXXhX
(φψ)-conformation: bpaalppbb
Pattern: [IV][EQY][GI][QY][GPT]x[FL][AK][EKR]x[DR][NW][GS]x[FVY][ADT]
Conservation:2.020-0.212-1.6430.691-1.132-1.0821.044-0.1240.576-0.6830.1001.1540.659-0.6830.314-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g43_A_1111g43   A112127IEIQTRFARNDWSNFDEEEEEEEEETT---EEbbbbbbbbxaaUxxxb
1nbc_A_1061nbc   A107122VQIQGRFAKNDWSNYTEEEEEEEEETT---EEbbbbbbbbxaalxxbb
1xgs_A_2621xgs   A262277IYGYPVLKEIRNGIVAEEEEEEEEETT---EEbbxbwxbbxaalxpbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g43_A_1111g43   A     CACALCIUM ION F - 126
1g43_A_1111g43   A     CACALCIUM ION D - 127
1nbc_A_1061nbc   A     CACALCIUM ION Y - 121
1nbc_A_1061nbc   A     CACALCIUM ION T - 122
1xgs_A_2621xgs   A     COCOBALT (II) ION Q - 278

Clusters included in this Subclass
CLUSTER: AR.4.216