Information on SUBCLASS 6.4.1 |
Subclass Accession number: 4089
Subclass: 6.4.1 ![]() Type: AR beta-beta link DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 7 Average sequence ID (%) : 15.6 +/- 19.1 Average RMSD (Å) : 1.086 +/- 0.376 Consensus geometry
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Consensus Sequence: | XXXppXpXXh |
(φψ)-conformation: | bbabaapabb |
Pattern: | [knr] | [cltv] | x | x | x | [NS] | [EHPS] | x | x | [DKPR] | [ektwy] | [flm] | x | x |
Conservation: | 0.482 | 0.281 | -0.939 | -0.592 | -0.850 | 2.898 | 0.434 | -0.375 | -0.563 | 0.345 | -0.562 | 0.680 | -0.511 | -0.727 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amx_*_273 | 1amx | - | 280 | 293 | KTKITNEQQKEFVN | EEEES-TT--EEEE | bbxxabaaxabbbb |
1b88_A_17 | 1b88 | A | 22 | 35 | NCSYENSAFDYFPW | EEEE--TT--EEEE | xbbbaxaaxabbxb |
1bd2_D_18 | 1bd2 | D | 21 | 34 | NCDYTNSMFDYFLW | EEEE--TT--EEEE | xbbbapaaxabbbb |
1bd2_D_44 | 1bd2 | D | 45 | 58 | FLISISSIKDKNAD | EEEEEETT-SEEEE | xaebbxaaxabbbb |
1fcg_A_128 | 1fcg | A | 128 | 141 | KSQKFSHLDPTFSI | EEEEEESS--EEEE | bxabbbaaxabbbb |
1fo0_B_19 | 1fo0 | B | 22 | 35 | RCILKNSQYPWMSW | EEEES-TT--EEEE | bbbxabaabaxbbb |
1qg3_A_1271 | 1qg3 | A | 1272 | 1285 | KVLVDNPKNRMLLI | EEEE--TT--EEEE | bbxbabaaxabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qg3_A_1271 | 1qg3 | A | CACCACODYLATE ION | K - 1271 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1amx_*_273 | 1amx | * | CBRCOLLAGEN-BINDING RESIDUES IDENTIFIED BY SITE-DIRECTED MUTAGENESIS. | N - 278 |
Clusters included in this Subclass |
CLUSTER: AR.5.79 |
CLUSTER: AR.6.116 |