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Information on SUBCLASS 6.13.1
Subclass Accession number: 4102
Subclass: 6.13.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 46.1 +/- 25.7
Average RMSD (Å) : 0.371 +/- 0.076

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pTCPXGpNhC
(φψ)-conformation: bppppgbabb
Pattern: x[ekq][DT][C][AP][aenp][G][EKQ][DN][ILV][C][FY][krt][kmr][afmt][hlmw]
Conservation:-1.065-0.644-0.1012.0400.276-0.9261.008-0.1360.335-0.1432.0400.574-0.753-0.692-0.927-0.885
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ff4_A_121ff4   A1429TEDCPAGQNVCFKRWHEEE--TT--EEEEEEEbbxxxpgbabbbbbxx
1h0j_A_111h0j   A1126YKTCPAGKNLCYKMFMEEE--TT--EEEEEEEbbxxxxgbabxbbbbx
1hc9_A_121hc9   A1328AVTCPPGENLCYRKMWEEE--TT--EEEEEEEpbxxxxvbabbbbbbb
1kba_A_101kba   A1126PQTCPNGQDICFLKAQEEE--TT--EEEEEEEwbxxbxgxabxbbbbb
1kxi_A_121kxi   A1227YKTCPEGKNLCFKATLEEE--TT--EEEEEEEbbxxppvbabxbbxbx
1ntn_*_101ntn   -1126SETCAPGQNLCYTKTWEEE--TT--EEEEEEEbbxxxpgxabbbbbbb
1tgx_A_111tgx   A1126WKTCPKGKNLCYKMTMEEE--TT--EEEEEEEbbxxxpvbabbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ff4_A_121ff4   A     SULSULFATE ANION K - 26
1ff4_A_121ff4   A     SULSULFATE ANION W - 28
1h0j_A_111h0j   A     SDSDODECYL SULFATE Y - 11
1h0j_A_111h0j   A     SDSDODECYL SULFATE K - 12
1h0j_A_111h0j   A     SDSDODECYL SULFATE T - 13
1hc9_A_121hc9   A     IDOIODO GROUP R - 25
1hc9_A_121hc9   A     IDOIODO GROUP K - 26
1hc9_A_121hc9   A     IDOIODO GROUP M - 27
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0j_A_111h0j   A AC6SDS BINDING SITE FOR CHAIN AK - 12
1h0j_A_111h0j   A AC9SDS BINDING SITE FOR CHAIN CT - 13
1hc9_A_121hc9   A AC1IDO BINDING SITE FOR CHAIN AR - 25

Clusters included in this Subclass
CLUSTER: AR.5.43