Information on SUBCLASS 6.13.1 |
Subclass Accession number: 4102
Subclass: 6.13.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 46.1 +/- 25.7 Average RMSD (Å) : 0.371 +/- 0.076 Consensus geometry
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Consensus Sequence: | pTCPXGpNhC |
(φψ)-conformation: | bppppgbabb |
Pattern: | x | [ekq] | [DT] | [C] | [AP] | [aenp] | [G] | [EKQ] | [DN] | [ILV] | [C] | [FY] | [krt] | [kmr] | [afmt] | [hlmw] |
Conservation: | -1.065 | -0.644 | -0.101 | 2.040 | 0.276 | -0.926 | 1.008 | -0.136 | 0.335 | -0.143 | 2.040 | 0.574 | -0.753 | -0.692 | -0.927 | -0.885 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ff4_A_12 | 1ff4 | A | 14 | 29 | TEDCPAGQNVCFKRWH | EEE--TT--EEEEEEE | bbxxxpgbabbbbbxx |
1h0j_A_11 | 1h0j | A | 11 | 26 | YKTCPAGKNLCYKMFM | EEE--TT--EEEEEEE | bbxxxxgbabxbbbbx |
1hc9_A_12 | 1hc9 | A | 13 | 28 | AVTCPPGENLCYRKMW | EEE--TT--EEEEEEE | pbxxxxvbabbbbbbb |
1kba_A_10 | 1kba | A | 11 | 26 | PQTCPNGQDICFLKAQ | EEE--TT--EEEEEEE | wbxxbxgxabxbbbbb |
1kxi_A_12 | 1kxi | A | 12 | 27 | YKTCPEGKNLCFKATL | EEE--TT--EEEEEEE | bbxxppvbabxbbxbx |
1ntn_*_10 | 1ntn | - | 11 | 26 | SETCAPGQNLCYTKTW | EEE--TT--EEEEEEE | bbxxxpgxabbbbbbb |
1tgx_A_11 | 1tgx | A | 11 | 26 | WKTCPKGKNLCYKMTM | EEE--TT--EEEEEEE | bbxxxpvbabbbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ff4_A_12 | 1ff4 | A | SULSULFATE ANION | K - 26 |
1ff4_A_12 | 1ff4 | A | SULSULFATE ANION | W - 28 |
1h0j_A_11 | 1h0j | A | SDSDODECYL SULFATE | Y - 11 |
1h0j_A_11 | 1h0j | A | SDSDODECYL SULFATE | K - 12 |
1h0j_A_11 | 1h0j | A | SDSDODECYL SULFATE | T - 13 |
1hc9_A_12 | 1hc9 | A | IDOIODO GROUP | R - 25 |
1hc9_A_12 | 1hc9 | A | IDOIODO GROUP | K - 26 |
1hc9_A_12 | 1hc9 | A | IDOIODO GROUP | M - 27 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0j_A_11 | 1h0j | A | AC6SDS BINDING SITE FOR CHAIN A | K - 12 |
1h0j_A_11 | 1h0j | A | AC9SDS BINDING SITE FOR CHAIN C | T - 13 |
1hc9_A_12 | 1hc9 | A | AC1IDO BINDING SITE FOR CHAIN A | R - 25 |
Clusters included in this Subclass |
CLUSTER: AR.5.43 |