Information on SUBCLASS 6.24.1 |
Subclass Accession number: 4114
Subclass: 6.24.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 34.3 +/- 34.9 Average RMSD (Å) : 0.775 +/- 0.486 Consensus geometry
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Consensus Sequence: | hXpppcpXhh |
(φψ)-conformation: | bbpaalbpbb |
Pattern: | [FY] | x | [NT] | [KNS] | [DKR] | [GK] | [KS] | x | [IV] | [AL] | x | [ILM] | [EW] | x | [ITV] | x | [HI] |
Conservation: | 2.384 | -1.092 | 0.713 | -0.065 | -0.479 | -0.103 | 0.265 | -1.354 | 1.207 | -0.459 | -1.553 | 0.353 | 1.071 | 0.291 | -0.168 | -1.002 | -0.010 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jsd_A_154 | 1jsd | A | 158 | 174 | YTNNRGKSILFMWGINH | EE--SSS-EEEEEEEEE | bbxaavbxbxbbbbbxb |
1qxy_A_221 | 1qxy | A | 221 | 237 | FETSDKSFVAQIEHTVI | EE-TT---EEEEEEEEE | bbbaalpxbbbbbbxbb |
1rv0_H_164 | 1rv0 | H | 168 | 184 | YVNNKGKEVLVLWGVHH | EE--SSS-EEEEEEEEE | bxxaavbpbxbbbbbxb |
1rvx_A_164 | 1rvx | A | 168 | 184 | YVNKKGKEVLVLWGIHH | EE--SSSEEEEEEEEEE | bbxaavbxbxbbbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jsd_A_154 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 154 |
1jsd_A_154 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 155 |
1jsd_A_154 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 156 |
1qxy_A_221 | 1qxy | A | M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL | F - 221 |
1qxy_A_221 | 1qxy | A | COCOBALT (II) ION | Q - 231 |
1qxy_A_221 | 1qxy | A | M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL | Q - 231 |
1qxy_A_221 | 1qxy | A | COCOBALT (II) ION | E - 233 |
1qxy_A_221 | 1qxy | A | M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL | E - 233 |
1rvx_A_164 | 1rvx | A | SIAO-SIALIC ACID | H - 183 |
1rvx_A_164 | 1rvx | A | SIAO-SIALIC ACID | H - 184 |
Clusters included in this Subclass |
CLUSTER: AR.5.85 |