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Information on SUBCLASS 6.24.1
Subclass Accession number: 4114
Subclass: 6.24.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 34.3 +/- 34.9
Average RMSD (Å) : 0.775 +/- 0.486

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXpppcpXhh
(φψ)-conformation: bbpaalbpbb
Pattern: [FY]x[NT][KNS][DKR][GK][KS]x[IV][AL]x[ILM][EW]x[ITV]x[HI]
Conservation:2.384-1.0920.713-0.065-0.479-0.1030.265-1.3541.207-0.459-1.5530.3531.0710.291-0.168-1.002-0.010
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jsd_A_1541jsd   A158174YTNNRGKSILFMWGINHEE--SSS-EEEEEEEEEbbxaavbxbxbbbbbxb
1qxy_A_2211qxy   A221237FETSDKSFVAQIEHTVIEE-TT---EEEEEEEEEbbbaalpxbbbbbbxbb
1rv0_H_1641rv0   H168184YVNNKGKEVLVLWGVHHEE--SSS-EEEEEEEEEbxxaavbpbxbbbbbxb
1rvx_A_1641rvx   A168184YVNKKGKEVLVLWGIHHEE--SSSEEEEEEEEEEbbxaavbxbxbbbbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jsd_A_1541jsd   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 154
1jsd_A_1541jsd   A     NAGN-ACETYL-D-GLUCOSAMINE D - 155
1jsd_A_1541jsd   A     NAGN-ACETYL-D-GLUCOSAMINE A - 156
1qxy_A_2211qxy   A     M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL F - 221
1qxy_A_2211qxy   A     COCOBALT (II) ION Q - 231
1qxy_A_2211qxy   A     M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL Q - 231
1qxy_A_2211qxy   A     COCOBALT (II) ION E - 233
1qxy_A_2211qxy   A     M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL E - 233
1rvx_A_1641rvx   A     SIAO-SIALIC ACID H - 183
1rvx_A_1641rvx   A     SIAO-SIALIC ACID H - 184

Clusters included in this Subclass
CLUSTER: AR.5.85