Information on SUBCLASS 6.43.1 |
Subclass Accession number: 4133
Subclass: 6.43.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005529 (>50 %) GO:0030246 (>50 %) SCOP : 50352 (>50 %) 50370 (>50 %) 50371 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 21.2 +/- 23.3 Average RMSD (Å) : 1.100 +/- 0.458 Consensus geometry
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Consensus Sequence: | XXXpcpXXXX |
(φψ)-conformation: | bpeapappbp |
Pattern: | x | [ALT] | x | [NQ] | [DGN] | [ST] | [ANS] | [PT] | x | x | [T] |
Conservation: | -1.122 | -0.795 | 0.308 | 0.673 | -0.059 | 0.637 | -0.386 | 0.597 | -1.122 | -0.877 | 2.148 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1abr_B_137 | 1abr | B | 137 | 147 | RTGNNTSPFVT | EESS----EEE | bxeaxaxxbxb |
1m2t_B_380 | 1m2t | B | 380 | 390 | LAGNDTAPRET | EESS--S-EEE | bxeaxaxpxxb |
1rwh_A_526 | 1rwh | A | 534 | 544 | NLHQGSNTLTT | EEET----EEE | xaeaxapxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1abr_B_137 | 1abr | B | NAGN-ACETYL-D-GLUCOSAMINE | G - 139 |
1abr_B_137 | 1abr | B | NAGN-ACETYL-D-GLUCOSAMINE | N - 140 |
1abr_B_137 | 1abr | B | MANALPHA-D-MANNOSE | N - 140 |
1abr_B_137 | 1abr | B | NAGN-ACETYL-D-GLUCOSAMINE | N - 141 |
1m2t_B_380 | 1m2t | B | GOLGLYCEROL | L - 380 |
1m2t_B_380 | 1m2t | B | NAGN-ACETYL-D-GLUCOSAMINE | N - 383 |
1m2t_B_380 | 1m2t | B | GOLGLYCEROL | R - 388 |
1m2t_B_380 | 1m2t | B | GOLGLYCEROL | Y - 393 |
Clusters included in this Subclass |
CLUSTER: AR.5.217 |