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PDB code:

Information on SUBCLASS 7.5.1

Subclass Accession number: 4146 Subclass: 7.5.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 32 Average sequence ID (%) : 41.5 +/- 29.8 Average RMSD (Å) : 0.381 +/- 0.103 Consensus geometry d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a2y_B_57	1a2y	B	57	70	TDYNSALKSRLSIS	EEE-TTTGGGEEEE	bbbxaaaaaabbbb
1c5d_B_57	1c5d	B	57	70	PYYNSALKSRLSIN	EEE-TTTSSSEEEE	wbbxaaaaaabbbb
1cic_B_58	1cic	B	58	71	SNYDEKFKSKATLT	EEE-GGGTTTEEEE	bbbxaaaaaabbxb
1cz8_H_58	1cz8	H	58	71	PTYAADFKRRFTFS	EEE-GGGTTTEEEE	xbbxaaaaaabbxb
1dn0_B_57	1dn0	B	57	70	TNYNPSLKSRVTIS	EEE-TTTTTTEEEE	bbbxaaaaaaxbbb
1e4w_H_57	1e4w	H	57	70	TNYNEKFKTKATLT	EEE-GGGTTTEEEE	bbbxaaaaaabbxb
1eap_B_58	1eap	B	58	71	IKYNEKFKVKATLT	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1fe8_H_57	1fe8	H	57	70	TTYHSALISRLSIS	EEE-GGGTTTEEEE	bbbpaaaaaaxbbb
1h8n_A_188	1h8n	A	189	202	TNYNQKFKDKATLT	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1iqd_B_57	1iqd	B	58	71	SIYAREFQGSVTMT	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1jhl_H_57	1jhl	H	58	71	TNYNQKFKDKATLT	EEE-TTTTTTEEEE	bbbpaaaaaabbbb
1jpt_H_58	1jpt	H	58	71	TIYDPKFQDRATIS	EEE-TTTTTTEEEE	bbbxaaaaaabbbb
1jv5_B_358	1jv5	B	358	371	TNYNEKFKSKATLT	EEE-TTSTTTEEEE	bbbxaaaaaabbxb
1kb5_H_57	1kb5	H	57	70	ISYNQKFKGRATLT	EEE-TTTTTTEEEE	bbbpaaaaaaxbxb
1kcv_H_58	1kcv	H	58	71	TSYNPSLKSRISIT	EEE-TTTTTTEEEE	bbbxaaaaaabbbb
1mex_H_56	1mex	H	57	70	IKYNEKFKGKATLT	EEE-GGGTTTEEEE	bbbpaaaaaabbbb
1mfa_*_307	1mfa	-	308	321	TFYNHKFRAKTKLT	EEE-TTTTTTEEEE	bbbxaaaaaabbbb
1mju_H_56	1mju	H	57	70	THYNEKFKNKATLT	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1mre_H_56	1mre	H	57	70	TNYNQKFKGKATLT	EEE-GGGTTTEEEE	bbbxaaaaaNbbbb
1mvu_B_57	1mvu	B	58	71	TKYAPKFQDKATII	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1n0x_H_57	1n0x	H	57	70	KEFSAKFQDRVTFT	EEE-TTTTTTEEEE	bbbxaaaaaabbbb
1nc2_B_57	1nc2	B	57	70	TAYTAAFISRLNIY	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1oaq_H_58	1oaq	H	58	71	TKYNEKFKSKATLT	EEE-GGGTTTEEEE	bbbpaaaaaabbxb
1oar_I_58	1oar	I	58	71	TKYNEKFKSKATLT	EEE-TTTTTTEEEE	bbbxaaaaaNbbxb
1q0x_H_57	1q0x	H	57	70	TIFNEKFKGKATFT	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1rih_H_56	1rih	H	57	70	TESNQKFKDKAILT	EEE-GGGTTTEEEE	bbbxaaaaaabbbb
1wej_H_58	1wej	H	58	71	TKYDPKFQDKATIT	EEE-GGGTTTEEEE	bbbxaaaaaabbxb
2f5b_H_59	2f5b	H	59	72	KRYSPSLNTRLTIT	EEE-TTTGGGEEEE	bbbxaaaaaabbbb
2fbj_H_58	2fbj	H	58	71	INYTPSLKDKFIIS	EEE-TTTTTTEEEE	bbbxaaaaaNbbxb
2hrp_H_57	2hrp	H	57	70	IYYADTVKGRFTIS	EEE-TTTTTTEEEE	bbbxaaaaaabbxb
2pcp_B_56	2pcp	B	57	70	NGYNHKFKGKATLT	EEE-TTTTTTEEEE	bbbxaaaaaaxbbb
43c9_B_57	43c9	B	57	70	IEYNPALKSRLSIS	EEE-TTGGGTEEEE	bbbxaaaaaaxbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1fe8_H_57	1fe8	H	NAGN-ACETYL-D-GLUCOSAMINE	T - 57
1fe8_H_57	1fe8	H	NAGN-ACETYL-D-GLUCOSAMINE	T - 58
1h8n_A_188	1h8n	A	GOLGLYCEROL	T - 189
1h8n_A_188	1h8n	A	GOLGLYCEROL	Y - 191
1h8n_A_188	1h8n	A	GOLGLYCEROL	F - 195
1h8n_A_188	1h8n	A	GOLGLYCEROL	K - 196
1h8n_A_188	1h8n	A	GOLGLYCEROL	D - 197
1h8n_A_188	1h8n	A	GOLGLYCEROL	A - 199
1mfa_*_307	1mfa	*	MMAO1-METHYL-MANNOSE	A - 307
1mfa_*_307	1mfa	*	GALD-GALACTOSE	F - 309
1mfa_*_307	1mfa	*	MMAO1-METHYL-MANNOSE	F - 309
1mfa_*_307	1mfa	*	ABEABEQUOSE	F - 309
1n0x_H_57	1n0x	H	ORNORNITHINE	K - 57
1n0x_H_57	1n0x	H	GOLGLYCEROL	K - 57
1n0x_H_57	1n0x	H	GOLGLYCEROL	F - 69
1n0x_H_57	1n0x	H	GOLGLYCEROL	T - 70
1n0x_H_57	1n0x	H	GOLGLYCEROL	A - 71
1n0x_H_57	1n0x	H	GOLGLYCEROL	D - 72
1oar_I_58	1oar	I	AZNALIZARIN RED	K - 59
1q0x_H_57	1q0x	H	PG4TETRAETHYLENE GLYCOL	I - 58
2fbj_H_58	2fbj	H	NAGN-ACETYL-D-GLUCOSAMINE	I - 58
2fbj_H_58	2fbj	H	NAGN-ACETYL-D-GLUCOSAMINE	N - 59
2fbj_H_58	2fbj	H	NAGN-ACETYL-D-GLUCOSAMINE	Y - 60
2fbj_H_58	2fbj	H	NAGN-ACETYL-D-GLUCOSAMINE	T - 61
2fbj_H_58	2fbj	H	NAGN-ACETYL-D-GLUCOSAMINE	P - 62
2fbj_H_58	2fbj	H	NAGN-ACETYL-D-GLUCOSAMINE	K - 65

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1oar_I_58	1oar	I	BC3AZN BINDING SITE FOR CHAIN I	K - 59

Clusters included in this Subclass

CLUSTER: AR.6.4

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