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Information on SUBCLASS 7.13.1
Subclass Accession number: 4154
Subclass: 7.13.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 15.9 +/- 21.7
Average RMSD (Å) : 1.350 +/- 0.333

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpXpphXXGpX
(φψ)-conformation: bbaaabppgbb
Pattern: [cfi]x[CFIV][DKPS][aklm][NQRST][DKNTY][ILTV][DPS]x[GW][ehkm]xx[aik][filv][EKTWY]x
Conservation:-0.376-0.8480.5920.433-0.1310.303-0.3250.9991.603-1.0042.780-0.358-0.415-0.992-0.411-0.259-0.413-1.180
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f6f_B_611f6f   B6279CFFSKQYTSIWKIYIITVEEE-TTT--SS-EEEEEEbbbxaaabbbvbxbbbbb
1fqt_A_41fqt   A522RVCDRRDVPEGEALKVESEEEEGGGS-TT-EEEEEExabxaaabxpvbbbxbbb
1gpi_A_1221gpi   A126143FDVDMSNLPCGLNGALYLEEEE-TT--TT-EEEEEEbbbbaaabxpvbbxbbbb
1ojj_A_1281ojj   A131148FDVDATKLPCGMNSALYLEEEE-TT--TT-EEEEEEbbbbaaabxpgxbxbbbb
1rie_*_741rie   -7491IEIKLSDIPEGKNMAFKWEEEEGGGS-TT-EEEEEEbbbxaaabxpvxbbbbbb
1rsy_*_2381rsy   -243260FKVPMNTVDFGHVTEEWREEEEGGG---SS-EEEEEbbbxaaaxxxvbxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ojj_A_1281ojj   A     GLCGLUCOSE N - 143
1ojj_A_1281ojj   A     GLCGLUCOSE A - 145
1ojj_A_1281ojj   A     GALD-GALACTOSE A - 145
1ojj_A_1281ojj   A     GLCGLUCOSE L - 146
1ojj_A_1281ojj   A     GLCGLUCOSE Y - 147
1ojj_A_1281ojj   A     GALD-GALACTOSE Y - 147
1ojj_A_1281ojj   A     GLCGLUCOSE L - 148
1ojj_A_1281ojj   A     GLCGLUCOSE S - 149
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ojj_A_1281ojj   A AC2GLC BINDING SITE FOR CHAIN AN - 143
1ojj_A_1281ojj   A AC2GLC BINDING SITE FOR CHAIN AA - 145
1ojj_A_1281ojj   A AC3GAL BINDING SITE FOR CHAIN AY - 147

Clusters included in this Subclass
CLUSTER: AR.7.161
CLUSTER: AR.9.39