ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.30.1

Subclass Accession number: 4171
Subclass: 7.30.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.4 (>75 %)  3.4.23 (>75 %)
GO : GO:0004175 (>75 %)  GO:0004190 (>75 %)  GO:0008233 (>75 %)
SCOP : 50629 (>75 %)  50630 (>75 %)  50646 (>75 %)

Number of loops: 4

Average sequence ID (%) : 36.7 +/- 22.7
Average RMSD (Å) : 0.325 +/- 0.050

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	hXVpXphYWph
(φψ)-conformation:	bppabpIppbb

Pattern:	[HNST]	[WY]	[LV]	[NP]	[V]	[RST]	x	[EKQ]	[AGQ]	[Y]	[W]	[EQ]	[FIV]	[HKT]	[FLV]	[DE]	[GQS]	[IV]	[EGT]	[ILMV]
Conservation:	-0.651	1.405	-0.234	-0.038	0.349	-0.604	-0.899	-0.211	-0.787	1.519	3.080	0.223	-0.409	-0.793	-0.555	0.400	-0.710	0.153	-0.927	-0.310

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dpj_A_175	1dpj	A	180	199	TWLPVRRKAYWEVKFEGIGL	EEEE-SSBTTBEEEEEEEEE	xxbpxabxIxxxbxxabbbb
1lya_B_191	1lya	B	196	215	SYLNVTRKAYWQVHLDQVEV	EEEE-SSBTTBEEEEEEEEE	bbbxxaxxIxxxbbxabbbb
3cms_*_175	3cms	-	180	199	HWVPVTVQQYWQFTVDSVTI	EEEE-SSBTTBEEEEEEEEE	bxbxxabxIxxbbbxabbbb
4pep_*_180	4pep	-	180	199	NWVPVSVEGYWQITLDSITM	EEEE-SSBTTBEEEEEEEEE	bbbxxabxIxxxbbxabbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dpj_A_175	1dpj	A	MANALPHA-D-MANNOSE	K - 187
1lya_B_191	1lya	B	NAGN-ACETYL-D-GLUCOSAMINE	Y - 197
1lya_B_191	1lya	B	NAGN-ACETYL-D-GLUCOSAMINE	L - 198
1lya_B_191	1lya	B	NAGN-ACETYL-D-GLUCOSAMINE	N - 199

Clusters included in this Subclass

CLUSTER: AR.6.182

CLUSTER: AR.7.129