Information on SUBCLASS 8.1.1 |
Subclass Accession number: 4187
Subclass: 8.1.1 ![]() Type: AR beta-beta link DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 95 Average sequence ID (%) : 55.3 +/- 26.7 Average RMSD (Å) : 0.512 +/- 0.190 Consensus geometry
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Consensus Sequence: | hSGhphppphhp |
(φψ)-conformation: | bbgbpaaabpbb |
Pattern: | [kqrst] | [ilmv] | [st] | [c] | [aegkqrst] | [agstv] | [st] | [gn] | [filty] | [adnrst] | [filv] | [dgknrst] | [adegknrst] | x | x | [filmvw] | [dehnsty] | [w] | [afilmv] | [knr] | [ekqr] |
Conservation: | -0.387 | 0.103 | 0.218 | 2.342 | -0.749 | -0.404 | 0.246 | 0.630 | -0.352 | -0.723 | -0.258 | -0.715 | -0.652 | -0.694 | -1.043 | -0.238 | -0.601 | 3.029 | -0.355 | 0.280 | 0.323 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
12e8_H_18 | 12e8 | H | 19 | 39 | KLSCTASGFNIKDYYIHWVKQ | EEEEEEESS-GGGEEEEEEEE | bxbbbxbvbbaaabbbbbbxb |
1a14_H_19 | 1a14 | H | 19 | 39 | RMSCKASGYTFTNYNMYWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxxxbbbx |
1a2y_B_18 | 1a2y | B | 19 | 39 | SITCTVSGFSLTGYGVNWVRQ | EEEEEEESS-TTSSEEEEEEE | bbbbxbbvbxaaabxbbbbbb |
1a6w_H_318 | 1a6w | H | 319 | 339 | KLSCKASGYTFTSYWMHWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbxxbvbxaaabxbbbbbb |
1aqk_H_18 | 1aqk | H | 19 | 39 | RLSCAASGFTFNNYAIHWVRQ | EEEEEEESS-GGG--EEEEEE | bxbbbbbvbxaaabxbbbbbb |
1axt_H_18 | 1axt | H | 19 | 39 | KLSCVVSGLTFSRFWMSWVRQ | EEEEEEESS-GGGSEEEEEEE | bxbbxbbgbxaaabxbbbbbb |
1bm3_H_18 | 1bm3 | H | 19 | 39 | KLSCAASGFTFSSYGMSWVRQ | EEEEEEESS-GGG--EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1bz7_B_18 | 1bz7 | B | 19 | 39 | KLSCAASGFTFSNFGMHWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1c1e_H_18 | 1c1e | H | 19 | 39 | KISCKASGYMFTNYGMNWVKQ | EEEEEEESS-GGGSEEEEEEE | bbxbxxbvbxaaabxbbbbbb |
1c5c_H_18 | 1c5c | H | 19 | 39 | KLSCRASGYSFTSYWMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabpbbbbbb |
1ce1_H_18 | 1ce1 | H | 19 | 39 | SLTCTVSGFTFTDFYMNWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1cfv_H_18 | 1cfv | H | 19 | 39 | TLSCVASGFTFNTYYMSWVRQ | EEEEEEESS-GGGSEEEEEEE | bbbbxbbvbxaaabxbbbbbb |
1clo_H_18 | 1clo | H | 19 | 39 | RLSCATSGFTFTDYYMNWVRQ | EEEEEEESS-TTSS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1ct8_B_18 | 1ct8 | B | 19 | 39 | KLSCKTSGFTFSSSYINWLKQ | EEEEEEESS-STT-EEEEEEE | bxbbxbbvbxaaaxbxbbbbb |
1cz8_H_18 | 1cz8 | H | 19 | 39 | RLSCAASGYDFTHYGMNWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbbxbvbxaaabxbbbbbb |
1d5i_H_18 | 1d5i | H | 19 | 39 | KISCKATGYTFSSYWIEWVKQ | EEEEEEESS-GGGEEEEEEEE | bbbbbxbvbxaaabxbxbbbb |
1dvf_D_19 | 1dvf | D | 19 | 39 | KLSCTASGFNIKDTHMNWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxxbvbbaaabbxbbbbb |
1e4w_H_18 | 1e4w | H | 19 | 39 | KLSCKASGFTFTNYWMHWVKQ | EEEEEEESS--TTSEEEEEEE | bxbbxxbvbbaaabxbbbbbb |
1e6o_H_18 | 1e6o | H | 19 | 39 | KMSCKASGYTFTSYTMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1eap_B_18 | 1eap | B | 19 | 39 | KISCKASGYISTDHAIHWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxxxvbxaaabxxbbbbb |
1ejo_H_2517 | 1ejo | H | 2518 | 2538 | KLSCAASGFTFSSYTMSWVRQ | EEEEEE-SS-GGGSEEEEEEE | bbbbxbbgbxaaabxbbbbbb |
1emt_H_18 | 1emt | H | 19 | 39 | KISCKTSGYVFSSSWMNWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1f2x_K_818 | 1f2x | K | 819 | 839 | RLSCAASGYTVSTYCMGWFRQ | EEEEEEESS-TTTS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1f4x_H_18 | 1f4x | H | 19 | 39 | RLSCAASGYVFSTYDMSWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1fe8_H_18 | 1fe8 | H | 19 | 39 | SITCTVSGFSLTTYGVSWVRQ | EEEEEEESS-TTTSEEEEEEE | bbbbbbbgbxaaaxxbbbbbb |
1fgv_H_18 | 1fgv | H | 19 | 39 | RLSCATSGYTFTEYTMHWMRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1fns_H_232 | 1fns | H | 233 | 253 | SITCTVSGFSLTDYGVDWVRQ | EEEEEEESS-TTSSEEEEEEE | bbbbbbbvbbaaabxbbbbbb |
1fvc_B_16 | 1fvc | B | 19 | 39 | RLSCAASGFNIKDTYIHWVRQ | EEEEEEESS-TTTS-EEEEEE | bxbbbxbgbbaaaxxbbbbbb |
1gig_H_18 | 1gig | H | 19 | 39 | SITCTVSGFLLISNGVHWVRQ | EEEEEEESS-TTT-EEEEEEE | bbbbbbbvbbaaabxbbbbbb |
1h8n_A_149 | 1h8n | A | 150 | 170 | KLSCKASGYTFTSYWINWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxxbvbxaaabxbbbbbb |
1hil_B_18 | 1hil | B | 19 | 39 | KLSCAASGFSFSSYGMSWVRQ | EEEEEEESS-GGGSEEEEEEE | bxbbxbbvbxaaabxbbbbbb |
1hyx_H_18 | 1hyx | H | 19 | 39 | KLSCAASGFTFSNYAMSWVRQ | EEEEEEESS-GGGSEEEEEEE | bxbbxxbvbxaaabxbbbbbb |
1i3u_A_18 | 1i3u | A | 19 | 39 | KLSCEASGDSIGTYVIGWFRQ | EEEEEEESS-GGGSEEEEEEE | bxbbbbbgbxaaabxbbbbbb |
1i8k_B_318 | 1i8k | B | 319 | 339 | KLSCVTSGFTFRKFGMSWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1ind_H_18 | 1ind | H | 19 | 39 | KLSCAASGFTLSGETMSWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbbxbvbbaaabxbbbbbb |
1iqd_B_18 | 1iqd | B | 19 | 39 | KVSCKVSGYTLTELPVHWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbgbxaaabxbbbbbb |
1j05_B_18 | 1j05 | B | 19 | 39 | KLSCTASGFNIKDTYMHWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbxxbvbxaaabxbxbbbb |
1jfq_H_318 | 1jfq | H | 319 | 339 | KMSCKASGYTFTSNGINWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1jhl_H_18 | 1jhl | H | 19 | 39 | KLSCKASGYTFISYWINWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1jpt_H_18 | 1jpt | H | 19 | 39 | RLSCAASGFNIKEYYMHWVRQ | EEEEEEESS-GGGSEEEEEEE | bbbbxxbvbbaaabxbbbbbb |
1k6q_H_18 | 1k6q | H | 19 | 39 | KLSCKASGFNIKDYYMHWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbbxbvbbaaabxbbbbbb |
1kb5_H_18 | 1kb5 | H | 19 | 39 | KISCKASGYSFTGYNMNWVKQ | EEEEEEESS-STTSEEEEEEE | bxbbxxbvbxaaabbbbbbbb |
1keg_H_18 | 1keg | H | 19 | 39 | KMSCKASGYSFTSFWMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxxbvbxaaabxbbbbbb |
1kel_H_18 | 1kel | H | 19 | 39 | RLSCATSGFTFTDYYFNWARQ | EEEEEEESS-GGG-EEEEEEE | bxbbxbbvbxaaabxbbbbbb |
1l7i_H_18 | 1l7i | H | 19 | 39 | RLSCAASGFTFTDYTMDWVRQ | EEEEEEESS-GGGSEEEEEEE | bxbbxxbvbxaaabbbbbbbb |
1l7t_H_18 | 1l7t | H | 19 | 39 | KLSCAASGFTFSRYALSWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1lk3_H_18 | 1lk3 | H | 19 | 39 | KLSCKASGYTFTDFYIHWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbxxbvbxaaabxbbbbbb |
1lo0_H_18 | 1lo0 | H | 19 | 39 | KLSCAASGFSFRNYGMSWVRQ | EEEEEEESS-TTTSEEEEEEE | bbbbxxbvbbaaabxbbbbbb |
1lo4_H_18 | 1lo4 | H | 19 | 39 | TLSCEASGFTLRTYGMSWVRQ | EEEEEEESS-TTTSEEEEEEE | bbbbbxbgbbaaaxxbbxbbb |
1mex_H_18 | 1mex | H | 19 | 39 | KISCKASGYTFTDHAIHWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxxbvbxaaabxbbbbbb |
1mfa_*_268 | 1mfa | - | 269 | 289 | KMSCKASGYTFTNYWMHWIKQ | EEEEEEESS-GGGSEEEEEEE | bbbbxbbvbxaaabxbbbbbb |
1mju_H_18 | 1mju | H | 19 | 39 | KLSCKASGYTFTNYWINWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1mlb_B_18 | 1mlb | B | 19 | 39 | KISCKATGYTFSTYWIEWVKQ | EEEEEEESS-TTTS-EEEEEE | bbxbxbbvbxaaaxxxxbbbb |
1mqk_H_18 | 1mqk | H | 19 | 39 | KLSCAASGFTFSSYTMSWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
1mvu_B_18 | 1mvu | B | 19 | 39 | KLSCTASGFNIKDDFMHWVKQ | EEEEEEESS-GGGEEEEEEEE | bxbbxxbgbxaaabxbbbbbb |
1n0x_H_18 | 1n0x | H | 19 | 39 | KVSCQASGYRFSNFVIHWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbbbbvbxaaabxbxbbbb |
1n4x_H_318 | 1n4x | H | 319 | 339 | KISCKATNYAFTDYSMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1n7m_L_18 | 1n7m | L | 19 | 39 | KLSCKASGYTFTSYWMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxxbvbxaaabxbbbbbb |
1nc2_B_18 | 1nc2 | B | 19 | 39 | SITCTVSGFSLTDYGVHWVRQ | EEEEEEESS-TTT-EEEEEEE | bbbbbbbvbbaaabxbxbbbb |
1ndg_B_318 | 1ndg | B | 319 | 339 | SLTCSVTGDSIIRDYWSWIRK | EEEEEEESS-GGGS-EEEEEE | bbbbxxbvbbaaabbbbbbbb |
1ndm_B_318 | 1ndm | B | 319 | 339 | SLTCSVTGDSITSDYWSWIRK | EEEEEEESS-STTS-EEEEEE | bbbbxbbvbxaaabbbbbbbb |
1nl0_H_18 | 1nl0 | H | 19 | 39 | RLSCAASGFTFSTYAMHWVRQ | EEEEEEESS-GGG--EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1nlb_H_18 | 1nlb | H | 19 | 39 | KISCKASGYTFTDFSMHWVNQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1nqb_A_18 | 1nqb | A | 19 | 39 | KLSCKASGYTFTSYWMHWVKQ | EEEEEE-SS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1oaq_H_18 | 1oaq | H | 19 | 39 | KLSCKASGYTFTSYWMHWVKQ | EEEEEEESS-GGGEEEEEEEE | bxbbxxbvbxaaabpbbbbbb |
1op3_H_18 | 1op3 | H | 19 | 39 | ILSCGVSNFRISAHTMNWVRR | EEEEEEESS-GGGS-EEEEEE | bbbbbbbvbbaaabxbbbbbb |
1p2c_B_318 | 1p2c | B | 319 | 339 | KISCKATGYTFTTYWIEWIKQ | EEEEEEESS-TTTS-EEEEEE | bxbbxbbvbxaaaxxbbbbbb |
1p4b_H_19 | 1p4b | H | 20 | 40 | SITCTVSGFSLTDYGVNWVRQ | EEEEEEESS-TTTS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1p7k_B_18 | 1p7k | B | 19 | 39 | KMSCKASGYTFTSYVMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbaMxbvbxaaabxbxbbbb |
1pg7_X_18 | 1pg7 | X | 19 | 39 | KISCKASGYSFTGHLLNWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbxxbvbxaaabxbbbbbb |
1pz5_B_18 | 1pz5 | B | 19 | 39 | KLSCVASGFTFSNYWMEWVRQ | EEEEEEESS-GGGSEEEEEEE | bxbbbbbvbxaaabxbbbbbb |
1q0x_H_18 | 1q0x | H | 19 | 39 | KISCKATGYTFSSYWIEWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbxbbvbxaaabxbxbbbb |
1q1j_H_18 | 1q1j | H | 19 | 39 | RLTCVASGFTFSDVWLNWVRQ | EEEEEEESS-GGGSEEEEEEE | bxbbbbbgbxaaabxbbbbbb |
1q9r_B_18 | 1q9r | B | 19 | 39 | RLSCATSGFTFTDYYMSWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1qkz_H_18 | 1qkz | H | 19 | 39 | KLSCAASGFTFSDYYMFWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1qok_A_44 | 1qok | A | 45 | 65 | KLSCTASGFNIKDSYMHWLRQ | EEEEEEESS-GGGS-EEEEEE | bbbbbxbvbxaaabbxxbbbb |
1rih_H_18 | 1rih | H | 19 | 39 | KMSCRASGYSFTSYWIHWLKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbgbxaaabxbxbbbb |
1rur_H_18 | 1rur | H | 19 | 39 | KISCKASGYTFTNYWLGWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1rz7_H_18 | 1rz7 | H | 19 | 39 | KISCKASGYTFSDFYMYWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
1sm3_H_18 | 1sm3 | H | 19 | 39 | KLSCVASGFTFSNYWMNWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbbbbvbxaaabxbbbbbb |
1tet_H_18 | 1tet | H | 19 | 39 | RISCKASGYTFTTYGMSWVKQ | EEEEEEESS-GGGSEEEEEEE | bbxbbbbgbxaaabxbbbbbb |
1uac_H_18 | 1uac | H | 19 | 39 | SLTCSVTGDSITSDYWSWIRK | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabbbbbbbb |
1ub5_A_18 | 1ub5 | A | 19 | 39 | KLSCTASGITFSRYIMSWVRQ | EEEEEEES--GGGS-EEEEEE | bxbbbbbvbxaaabxxbbbbb |
1vge_H_19 | 1vge | H | 20 | 40 | KVSCKASGYSFTSYGLHWVRQ | EEEEEE-SS-GGGSEEEEEEE | bbbbxxbvbxaaabbbxbbbb |
1wej_H_18 | 1wej | H | 19 | 39 | KLSCTASGFNIKDTYMHWVKQ | EEEEEEESS-GGGS-EEEEEE | bbbbxxbvbbaaabxbbbbbb |
1yei_H_18 | 1yei | H | 19 | 39 | KLSCKTSGYIFTSYWIHWVKQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
2cgr_H_18 | 2cgr | H | 19 | 39 | QISCKATGYTFSEYWIEWVKE | EEEEEEESS-GGGSEEEEEEE | bbbbxxbvbxaaabxbxbbbb |
2fb4_H_18 | 2fb4 | H | 19 | 39 | RLSCSSSGFIFSSYAMYWVRQ | EEEEEEESS-GGGS-EEEEEE | bxbbxbbvbxaaabxbbbbbb |
2fbj_H_18 | 2fbj | H | 19 | 39 | KLSCAASGFDFSKYWMSWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbxbbvbxaaabxbbbbbb |
2hrp_H_18 | 2hrp | H | 19 | 39 | KLSCAASGFTFMRFGMHWVRQ | EEEEEEESS-GGGSEEEEEEE | bbbbxbbvbxaaabxbbbbbb |
2jel_H_18 | 2jel | H | 19 | 39 | KISCKGSGYTFTTYAMHWVKQ | EEEEEEESS-GGGSEEEEEEE | bxbbxbbvbxaaabxbbbbbb |
2pcp_B_17 | 2pcp | B | 19 | 39 | KMSCKASGYTFTDYYIHWNKQ | EEEEEEESS-TTTSEEEEEEE | bbbbbbbgbxaaabxbbbbbb |
43c9_B_18 | 43c9 | B | 19 | 39 | SITCTVSGISLSRYNVHWVRQ | EEEEEEESS-GGG-EEEEEEE | bbbxbbbvbbaaabbbbbbbb |
7fab_H_18 | 7fab | H | 19 | 39 | SLTCTVSGTSFDDYYWTWVRQ | EEEEEEESS-STTSEEEEEEE | bbbbbbbvbxaaabxxbbbbb |
8fab_B_18 | 8fab | B | 19 | 39 | RLSCIASGFTFSNYGMHWVRQ | EEEEEEESS-GGGS-EEEEEE | bbbbbbbvbxaaabxbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1a6w_H_318 | 1a6w | H | HAPBINDING SITE FOR THE HAPTEN, NIP, (4-HYDROXY-5-IODO-3-NITROPHENYL) ACETATE BOUND TO A LIPID CARRIER COMPLEXED TO FV FRAGMENT FOR CHAINS L AND H | W - 333 |
Clusters included in this Subclass |
CLUSTER: AR.6.205 |
CLUSTER: AR.7.0 |
CLUSTER: AR.8.1 |
CLUSTER: AR.9.2 |