Information on SUBCLASS 8.30.1 |
Subclass Accession number: 4219
Subclass: 8.30.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005507 (>75 %) SCOP : 49502 (>75 %) 49503 (>75 %) 49550 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 40.7 +/- 15.7 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | XhNGXhPXPXhX |
(φψ)-conformation: | bbllbbwpppbb |
Pattern: | x | [DHQ] | [A] | [IM] | [ATV] | [FV] | [N] | [G] | [STV] | [FMV] | [P] | [GS] | [P] | [LT] | [ILM] | [TV] | [GV] | [HK] |
Conservation: | -1.218 | -0.573 | 0.449 | -0.091 | -0.788 | -0.397 | 1.417 | 1.417 | -0.895 | -0.680 | 1.901 | -0.161 | 1.901 | -0.613 | -0.250 | -0.408 | -1.029 | 0.017 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gyc_A_22 | 1gyc | A | 22 | 39 | RDAIVVNGVFPSPLITGK | EEEEEETTBSS---EEEE | bxbbbblvbbwxxxbbbO |
1j9q_A_58 | 1j9q | A | 59 | 76 | VHAMAFNGTVPGPLMVVH | EEEEEETTSSS---EEEE | bxxbbxvvbbwxxxbbbb |
1oe1_A_52 | 1oe1 | A | 53 | 70 | LQAMTFNGSMPGPTLVVH | EEEEEETTBSS---EEEE | bxxbbxvvbbwpxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gyc_A_22 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 22 |
1gyc_A_22 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 23 |
1gyc_A_22 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 24 |
1j9q_A_58 | 1j9q | A | CUCOPPER (II) ION | M - 62 |
1j9q_A_58 | 1j9q | A | CUCOPPER (II) ION | F - 64 |
1oe1_A_52 | 1oe1 | A | CUCOPPER (II) ION | M - 56 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gyc_A_22 | 1gyc | A | NA1NAG BINDING SITE FOR CHAIN A | D - 23 |
Clusters included in this Subclass |
CLUSTER: AR.7.96 |