Information on SUBCLASS 9.13.1 |
Subclass Accession number: 4242
Subclass: 9.13.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.14 (>75 %) 1.14.13 (>75 %) 1.14.13.3922 (>50 %) 3 (>50 %) 4 (>50 %) GO : GO:0000166 (>75 %) GO:0004497 (>75 %) GO:0004517 (>75 %) GO:0005489 (>75 %) GO:0005509 (>75 %) GO:0005515 (>75 %) GO:0005516 (>75 %) GO:0010181 (>75 %) GO:0016705 (>75 %) GO:0016709 (>75 %) GO:0020037 (>75 %) GO:0046906 (>75 %) GO:0048037 (>75 %) GO:0050662 (>75 %) SCOP : 52128 (>75 %) 52129 (>75 %) 52130 (>75 %) 56511 (>75 %) 56512 (>75 %) 56513 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 81.0 +/- -5.5 Average RMSD (Å) : 0.225 +/- 0.050 Consensus geometry
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Consensus Sequence: | RhWNSQLhRYAGY |
(φψ)-conformation: | bbapababbppbb |
Pattern: | [R] | [ILV] | [W] | [N] | [AS] | [Q] | [L] | [IV] | [R] | [Y] | [A] | [G] | [Y] | [KQR] |
Conservation: | -0.039 | -1.061 | 2.591 | 0.399 | -1.119 | -0.039 | -0.478 | -0.694 | -0.039 | 0.837 | -0.478 | 0.399 | 0.837 | -1.117 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1nos_*_252 | 1nos | - | 252 | 265 | RLWNSQLIRYAGYQ | EE-SSBSS-B-EEE | bbaxababbxxbbx |
1om4_A_473 | 1om4 | A | 473 | 486 | RVWNSQLIRYAGYK | EE-SSBSS-B-EEE | bbaxababbxxbbx |
1q2o_A_244 | 1q2o | A | 244 | 257 | RIWNSQLVRYAGYR | EE-SSBSS-B-EEE | bbaxababbxxbbx |
4nos_A_258 | 4nos | A | 258 | 271 | RVWNAQLIRYAGYQ | EE-SSBSS-B-EEE | bxaxababbxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1om4_A_473 | 1om4 | A | ARGARGININE | Q - 478 |
1om4_A_473 | 1om4 | A | ARGARGININE | R - 481 |
1q2o_A_244 | 1q2o | A | DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE | S - 248 |
1q2o_A_244 | 1q2o | A | DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE | Q - 249 |
1q2o_A_244 | 1q2o | A | DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE | R - 252 |
Clusters included in this Subclass |
CLUSTER: AR.8.61 |