ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.14.1

Subclass Accession number: 425
Subclass: 6.14.1

Type: HE alpha-beta
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7 (>75 %)  2.7.3 (>75 %)  2.7.3.2 (>75 %)  4.3 (>75 %)  4.3.2 (>75 %)
GO : GO:0004111 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016775 (>75 %)  GO:0016829 (>75 %)  GO:0016840 (>75 %)  GO:0016842 (>75 %)  GO:0016874 (>50 %)  GO:0016879 (>75 %)
SCOP : 48556 (>75 %)  48557 (>75 %)  48558 (>75 %)  55930 (>75 %)  55931 (>75 %)  55935 (>75 %)  56058 (>75 %)  56059 (>75 %)

Number of loops: 4

Average sequence ID (%) : 25.9 +/- 21.5
Average RMSD (Å) : 0.500 +/- 0.183

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	hXppEhhXhX
(φψ)-conformation:	aapaaalabb

Pattern:	[DE]	x	[FHIV]	[AV]	x	[FILY]	[AL]	[S]	[AFTV]	[AL]	[AGT]	[IL]	[ILMV]	[AMT]	[AGI]	x	[FILV]	[EGS]	[KR]	[ILM]	[A]	x	[DE]	[ILW]	x	x	[LMY]	x	[QRT]	[PST]	[E]	[FIV]	[AGL]	[EF]	[LV]	x
Conservation:	1.929	-0.972	-0.797	0.173	-1.047	-0.077	-0.220	1.699	-0.941	0.059	-0.366	0.932	0.403	-0.493	-0.865	-1.181	-0.029	-0.414	1.322	0.699	1.699	-1.122	1.547	-0.307	-1.163	-1.325	0.008	-0.334	-0.161	-0.044	2.467	0.319	-0.755	-0.084	0.715	-1.277

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c3c_A_217	1c3c	A	217	252	DRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLEVE	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT-SEE	aaaaaaaaaaaaaaaaaaaaaaaaaaaaxaaalabb
1dof_A_220	1dof	A	221	256	ESFAVLASALALMAAVFERLAVEIRELSRPEIGEVV	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT-SEE	aaaaaaaaaaaaaaaaaaaaaaaaaaaapaaalabb
1k7w_A_239	1k7w	A	239	274	DFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGFLT	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--EE	aaaaaaaaaaaaaaaaaaaaaaaaaaaaxaaavabb
1q5n_A_232	1q5n	A	232	267	DRIVEIASVLGIITGNVGKMARDWSLMMQTEIAEVF	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--EE	aaaaaaaaaaaaaaaaaaaaaaaaaaaapaaalabb

Clusters included in this Subclass