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Information on SUBCLASS 10.2.1
Subclass Accession number: 4255
Subclass: 10.2.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 28.5 +/- 24.6
Average RMSD (Å) : 0.530 +/- 0.327

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XhpCXpXpphPXhX
(φψ)-conformation: bbpaaaaaapppbb
Pattern: x[almtv][ILV][DKNPST][CL][ADEGNS][AEKNQST]x[dpqrs][NRSTY][FLM][EP][ADNPST][ilv][cstv][fr]x[FILV]
Conservation:-1.000-0.9170.891-0.4282.582-0.281-0.463-0.993-0.714-0.4920.5291.800-0.448-0.026-0.7920.339-0.9450.358
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b5f_B_2461b5f   B246262.QVDCNTLSSMPNVSFTI.EE-GGGGGG---EEEEE.bbxaaaaaaxxxbbbxb
1dpj_A_2451dpj   A245262YTLDCNTRDNLPDLIFNFEEE-GGGGGG---EEEEExbbxaaaaaaxwxbbbbb
1hrn_A_2451hrn   A245262YVVKCNEGPTLPDISFHLEEEETTTGGG---EEEEEbbbxaaaaaaxwxbbbxb
1htr_B_2471htr   B247264FLVNCNSIQNLPSLTFIIEEE-GGGGGGS--EEEEEbxbxaaaaaaxxxbbbbb
1lya_B_2601lya   B261278YMIPCEKVSTLPAITLKLEEEEGGGGGGS--EEEEEbbbxaaaaaaxxxbbbbb
1mg7_A_3541mg7   A354371SLVTLANSRRFEPECRVVEE--TTTGGGS--EEEEEbxxbaaaaaaxxpxbbbb
1pso_E_2451pso   E245262MVVSCSAISSLPDIVFTIEEE-GGGGGG---EEEEExbbxaaaaaaxwxxbxxb
1qdm_A_2541qdm   A254270.AVDCGSLGSMPDIEFTI.EE-GGGGTT---EEEEE.xbxaaaaaaxxxbbbbb
1smr_A_2441smr   A245262YVVSCSQVPTLPDISFNLEEEEGGGGGGS--EEEEEbbbxaaaaaaxxxbbbxb
3cms_*_2443cms   -245262FDIDCDNLSYMPTVVFEIEEE-TT-TTTS--EEEEEbbbxaaaaaaxxxbbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5f_B_2461b5f   B     NAGN-ACETYL-D-GLUCOSAMINE M - 255
1b5f_B_2461b5f   B     NAGN-ACETYL-D-GLUCOSAMINE P - 256
1b5f_B_2461b5f   B     NAGN-ACETYL-D-GLUCOSAMINE N - 257
1b5f_B_2461b5f   B     FUCFUCOSE N - 257
1dpj_A_2451dpj   A     NAGN-ACETYL-D-GLUCOSAMINE I - 259
1dpj_A_2451dpj   A     NAGN-ACETYL-D-GLUCOSAMINE N - 261
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1b5f_B_2461b5f   B 3N-GLYCOSYLATION SITE ON CHAIN B, ASN257: ASN257-NAG501-(B1->4)-NAG503-(B1->4)-MAN504 | (A1->3)-FUC502N - 257

Clusters included in this Subclass
CLUSTER: AR.10.7
CLUSTER: AR.9.11