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Information on SUBCLASS 10.4.1
Subclass Accession number: 4257
Subclass: 10.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 38.1 +/- 24.1
Average RMSD (Å) : 0.543 +/- 0.172

Consensus geometry
d (Å): 19 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hpWXXXFXXpXTpp
(φψ)-conformation: bbpabpppaaapbp
Pattern: [almv][ILMV][AILM][ILTV][NS][ACY][ILV][FWY][AF][K][AG][KNRS][W]xx[KPS][F][denp]x[EHKQ]x[T][hmqr][DENQ]x[DNPRT][F][HRY]
Conservation:-0.643-0.018-0.307-0.2330.679-0.5360.2220.6760.2321.020-0.031-0.3543.447-0.935-0.822-0.3201.424-0.768-0.976-0.145-1.3001.020-0.652-0.090-0.978-0.7941.424-0.242
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1as4_A_1801as4   A182209MVLVNYIFFKAKWEMPFDPQDTHQSRFYEEEEEEEEEEEEBSS---GGG-EEEEEEbbxbbbbbbbbbxabxxxaaaxbxbxbx
1hle_A_1801hle   A182209LVLVNAIYFKGNWQQKFMKEATRDAPFREEEEEEEEEEEEBSS---GGG-EEEEEEbbxbbbbbbbbxxabxxxaaaxbxbwbx
1jmj_A_2681jmj   A268295MMILNCIYFKGSWVNKFPVEMTHNHNFREEEEEEEEEEEEBSS---GGG-EEEEEEbbbbbbbbbbbbxabxbxaaaxbxbxbx
1lq8_A_1761lq8   A178205VIMVNYIFFKAKWETSFNHKGTQEQDFYEEEEEEEEEEEEBSS---GGG-EEEEEEbbbbbbbbbbbxxabxbxaaaxbxbxbx
1m93_B_1251m93   B125152LLAISAVYFKAKWLMPFEKEFTSDYPFYEEEEEEEEEEEEBSS---GGG-EEEEEEbbbbbbbbbbbxxabxxxaaaxbxbwbx
1mtp_A_1541mtp   A156183AILTNALWAKARWTTPFEAHLTREGTFREEEEEEEEEEEEBSS---GGG-EEEEEEbbbbbbbbbbxbpabxxxaaaxbxbbbx
1sek_*_1721sek   -172199SVLVNAIYFKGSWKDKFNKERTMDRDFHEEEEEEEEEEE-BSS---GGG-EEEEEEbbbbbbbbbbbbpabxxxaaaxbxbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jmj_A_2681jmj   A     CACALCIUM ION H - 290
1jmj_A_2681jmj   A     CACALCIUM ION N - 291
1jmj_A_2681jmj   A     CACALCIUM ION H - 292
1lq8_A_1761lq8   A     IOH2-PROPANOL, ISOPROPANOL K - 187
1lq8_A_1761lq8   A     IOH2-PROPANOL, ISOPROPANOL A - 188

Clusters included in this Subclass
CLUSTER: AR.10.44
CLUSTER: AR.10.72
CLUSTER: AR.9.29