Information on SUBCLASS 10.4.1 |
Subclass Accession number: 4257
Subclass: 10.4.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 38.1 +/- 24.1 Average RMSD (Å) : 0.543 +/- 0.172 Consensus geometry
|
Consensus Sequence: | hpWXXXFXXpXTpp |
(φψ)-conformation: | bbpabpppaaapbp |
Pattern: | [almv] | [ILMV] | [AILM] | [ILTV] | [NS] | [ACY] | [ILV] | [FWY] | [AF] | [K] | [AG] | [KNRS] | [W] | x | x | [KPS] | [F] | [denp] | x | [EHKQ] | x | [T] | [hmqr] | [DENQ] | x | [DNPRT] | [F] | [HRY] |
Conservation: | -0.643 | -0.018 | -0.307 | -0.233 | 0.679 | -0.536 | 0.222 | 0.676 | 0.232 | 1.020 | -0.031 | -0.354 | 3.447 | -0.935 | -0.822 | -0.320 | 1.424 | -0.768 | -0.976 | -0.145 | -1.300 | 1.020 | -0.652 | -0.090 | -0.978 | -0.794 | 1.424 | -0.242 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1as4_A_180 | 1as4 | A | 182 | 209 | MVLVNYIFFKAKWEMPFDPQDTHQSRFY | EEEEEEEEEEEEBSS---GGG-EEEEEE | bbxbbbbbbbbbxabxxxaaaxbxbxbx |
1hle_A_180 | 1hle | A | 182 | 209 | LVLVNAIYFKGNWQQKFMKEATRDAPFR | EEEEEEEEEEEEBSS---GGG-EEEEEE | bbxbbbbbbbbxxabxxxaaaxbxbwbx |
1jmj_A_268 | 1jmj | A | 268 | 295 | MMILNCIYFKGSWVNKFPVEMTHNHNFR | EEEEEEEEEEEEBSS---GGG-EEEEEE | bbbbbbbbbbbbxabxbxaaaxbxbxbx |
1lq8_A_176 | 1lq8 | A | 178 | 205 | VIMVNYIFFKAKWETSFNHKGTQEQDFY | EEEEEEEEEEEEBSS---GGG-EEEEEE | bbbbbbbbbbbxxabxbxaaaxbxbxbx |
1m93_B_125 | 1m93 | B | 125 | 152 | LLAISAVYFKAKWLMPFEKEFTSDYPFY | EEEEEEEEEEEEBSS---GGG-EEEEEE | bbbbbbbbbbbxxabxxxaaaxbxbwbx |
1mtp_A_154 | 1mtp | A | 156 | 183 | AILTNALWAKARWTTPFEAHLTREGTFR | EEEEEEEEEEEEBSS---GGG-EEEEEE | bbbbbbbbbbxbpabxxxaaaxbxbbbx |
1sek_*_172 | 1sek | - | 172 | 199 | SVLVNAIYFKGSWKDKFNKERTMDRDFH | EEEEEEEEEEE-BSS---GGG-EEEEEE | bbbbbbbbbbbbpabxxxaaaxbxbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jmj_A_268 | 1jmj | A | CACALCIUM ION | H - 290 |
1jmj_A_268 | 1jmj | A | CACALCIUM ION | N - 291 |
1jmj_A_268 | 1jmj | A | CACALCIUM ION | H - 292 |
1lq8_A_176 | 1lq8 | A | IOH2-PROPANOL, ISOPROPANOL | K - 187 |
1lq8_A_176 | 1lq8 | A | IOH2-PROPANOL, ISOPROPANOL | A - 188 |
Clusters included in this Subclass |
CLUSTER: AR.10.44 |
CLUSTER: AR.10.72 |
CLUSTER: AR.9.29 |