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Information on SUBCLASS 10.6.1
Subclass Accession number: 4259
Subclass: 10.6.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 46.5 +/- 21.1
Average RMSD (Å) : 0.250 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XWLXpKcNXYPXXc
(φψ)-conformation: bppbpbllbbpppb
Pattern: [LMV]x[W][L][ITV][EKQ][K][EGN][GN][AS][Y][P][IKT]x[DKS][AKNR][QS][Y][NTV]
Conservation:-0.340-0.9302.6930.238-0.524-0.2680.589-0.5690.022-0.2841.2901.290-1.000-0.846-0.634-0.813-0.3591.290-0.845
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jsd_A_1411jsd   A141159MRWLTQKNNAYPIQDAQYTEEE-B-SSS----EEEEEEbbxxbpbvlbbxxxbbbbb
1jsm_A_1471jsm   A147165VVWLIKKNNAYPTIKRSYNEEE-B-BTTB---EEEEEEbbxxbpbllbbxpxbbbbx
1rv0_H_1511rv0   H151169LLWLVKKGNSYPKLSKSYVEEE-B-SSS----EEEEEEbbxxbpbllbbxxxbbbbx
1rvx_A_1511rvx   A151169LLWLTEKEGSYPKLKNSYVEEE-B-SSS----EEEEEEbbxxbpbvvbbxxxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jsd_A_1411jsd   A     NAGN-ACETYL-D-GLUCOSAMINE I - 153
1jsd_A_1411jsd   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 154
1jsd_A_1411jsd   A     NAGN-ACETYL-D-GLUCOSAMINE D - 155
1jsd_A_1411jsd   A     NAGN-ACETYL-D-GLUCOSAMINE A - 156
1jsm_A_1471jsm   A     NAGN-ACETYL-D-GLUCOSAMINE N - 165
1rvx_A_1511rvx   A     SIAO-SIALIC ACID W - 153
1rvx_A_1511rvx   A     SIAO-SIALIC ACID T - 155

Clusters included in this Subclass
CLUSTER: AR.9.58