Information on SUBCLASS 10.6.1 |
Subclass Accession number: 4259
Subclass: 10.6.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 46.5 +/- 21.1 Average RMSD (Å) : 0.250 +/- 0.058 Consensus geometry
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Consensus Sequence: | XWLXpKcNXYPXXc |
(φψ)-conformation: | bppbpbllbbpppb |
Pattern: | [LMV] | x | [W] | [L] | [ITV] | [EKQ] | [K] | [EGN] | [GN] | [AS] | [Y] | [P] | [IKT] | x | [DKS] | [AKNR] | [QS] | [Y] | [NTV] |
Conservation: | -0.340 | -0.930 | 2.693 | 0.238 | -0.524 | -0.268 | 0.589 | -0.569 | 0.022 | -0.284 | 1.290 | 1.290 | -1.000 | -0.846 | -0.634 | -0.813 | -0.359 | 1.290 | -0.845 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jsd_A_141 | 1jsd | A | 141 | 159 | MRWLTQKNNAYPIQDAQYT | EEE-B-SSS----EEEEEE | bbxxbpbvlbbxxxbbbbb |
1jsm_A_147 | 1jsm | A | 147 | 165 | VVWLIKKNNAYPTIKRSYN | EEE-B-BTTB---EEEEEE | bbxxbpbllbbxpxbbbbx |
1rv0_H_151 | 1rv0 | H | 151 | 169 | LLWLVKKGNSYPKLSKSYV | EEE-B-SSS----EEEEEE | bbxxbpbllbbxxxbbbbx |
1rvx_A_151 | 1rvx | A | 151 | 169 | LLWLTEKEGSYPKLKNSYV | EEE-B-SSS----EEEEEE | bbxxbpbvvbbxxxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jsd_A_141 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | I - 153 |
1jsd_A_141 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 154 |
1jsd_A_141 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 155 |
1jsd_A_141 | 1jsd | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 156 |
1jsm_A_147 | 1jsm | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 165 |
1rvx_A_151 | 1rvx | A | SIAO-SIALIC ACID | W - 153 |
1rvx_A_151 | 1rvx | A | SIAO-SIALIC ACID | T - 155 |
Clusters included in this Subclass |
CLUSTER: AR.9.58 |