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Information on SUBCLASS 12.9.1
Subclass Accession number: 4290
Subclass: 12.9.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  1 (>75 %)  1.1 (>50 %)  1.1 (>75 %)  1.1.99 (>50 %)  1.1.99 (>75 %)  1.1.99.81.1.99.8
GO : GO:0005509 (>75 %)  GO:0016614 (>50 %)  GO:0016614 (>75 %)  GO:0018468 (>50 %)  GO:0018468 (>75 %)  
SCOP : 50997 (>75 %)  50997 (>75 %)  50998 (>75 %)  50998 (>75 %)  50999 (>75 %)  50999 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 50.8 +/- 19.7
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hSXLcQIcXXNVppLX
(φψ)-conformation: bbapaapbaaaaaapb
Pattern: [FY][S][DEPR][LM][DKT][DQ][I][DN][AK][AEGS][N][V][KR][DQS][L][GR][LP][A][W][STY][FMY][DNS]
Conservation:0.6910.356-1.0110.006-0.908-0.1520.3560.218-0.656-1.0111.2490.3560.184-0.6710.356-0.632-0.9010.3563.481-0.918-0.278-0.474
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h4i_A_261h4i   A2647FSDLKQINKGNVKQLRPAWTFSEE---SS-TTTGGGEEEEEEEEbbapaaxbaaaaaaxbxabbbx
1kb0_A_411kb0   A4162YSRLDQINAANVKDLGLAWSYNEE---SS-TTTGGGEEEEEEEEbxaxaaxbaaaaaaxbxabbbx
1kv9_A_301kv9   A3051FSPLKQIDASNVRSLGLAWYMDEE---SS-TTTGGGEEEEEEEEbbapaaxbaaaaaaxbxabbbx
1lrw_A_261lrw   A2647YSEMTDINKENVKQLRPAWSFSEE---SS-TTTGGGEEEEEEEEbbaxaaxbaaaaaaxbxabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kb0_A_411kb0   A     TRO2-HYDROXY-TRYPTOPHAN V - 52
1kb0_A_411kb0   A     CACALCIUM ION V - 52
1kb0_A_411kb0   A     TRO2-HYDROXY-TRYPTOPHAN K - 53
1kb0_A_411kb0   A     CACALCIUM ION K - 53
1kb0_A_411kb0   A     TRO2-HYDROXY-TRYPTOPHAN D - 54
1kb0_A_411kb0   A     TRO2-HYDROXY-TRYPTOPHAN L - 55
1kb0_A_411kb0   A     TRO2-HYDROXY-TRYPTOPHAN G - 56
1kv9_A_301kv9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID A - 47
1kv9_A_301kv9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID W - 48
1kv9_A_301kv9   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID Y - 49
1kv9_A_301kv9   A     GOLGLYCEROL M - 50
1kv9_A_301kv9   A     GOLGLYCEROL D - 51

Clusters included in this Subclass
CLUSTER: AR.11.19