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Information on SUBCLASS 18.2.1
Subclass Accession number: 4325
Subclass: 18.2.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.4 (>75 %)  2.7.4.3 (>75 %)  
GO : GO:0000166 (>75 %)  GO:0004017 (>75 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016776 (>75 %)  GO:0017076 (>75 %)  GO:0019205 (>75 %)  GO:0030554 (>75 %)  
SCOP : 57769 (>75 %)  57774 (>75 %)  57775 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 54.2 +/- 22.1
Average RMSD (Å) : 0.320 +/- 0.084

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: YHhXFNPPpXXGXXDXpGXELp
(φψ)-conformation: bbaaabppabplbpaaalppbb
Pattern: [STV][Y][H]xx[F][HN][P][P][AKQ]x[EP][GM][IKV][CD][D][IKV][CDT][G][EG][EP][L][ITY]x
Conservation:-0.7421.4681.857-1.001-1.1671.0780.2951.4681.468-0.624-1.067-0.214-0.549-0.932-0.3591.078-0.935-0.8391.078-0.569-0.2740.298-0.813-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ak2_*_1521ak2   -152175SYHEEFNPPKEPMKDDITGEPLIREEBTTTB--SSTTB-TTT--B-EEbbbaaabxxabwlbxaaavxxbbx
1e4y_A_1311e4y   A132155VYHVKFNPPKVEGKDDVTGEELTTEEETTTB--SSTTB-TTT--B-EEbbbaaabxxabxvbxaaavxpxbb
1p3j_A_1361p3j   A136158TYHLVFNPPKTPGICDKDGGELY.EEETTTB--SSTTB-TTT--BEE.bbbaaabxxabpvbxaaavxxxb.
1s3g_A_1361s3g   A136158SYHLLFNPPQVEGKCDKDGGELY.EEETTTB--SBTTB-TTT--BEE.bbbaaabxxabpvbpaaNvxxbb.
1zin_*_1361zin   -136158TYHLIFHPPAKPGVCDKCGGELY.EEETTTB--SSTTB-TTT--BEE.bbbaaabxxabpvbxaaavxxxb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4y_A_1311e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE V - 132
1e4y_A_1311e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE Y - 133
1e4y_A_1311e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE H - 134
1e4y_A_1311e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE V - 135
1e4y_A_1311e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE F - 137
1e4y_A_1311e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE N - 138
1p3j_A_1361p3j   A     MGMAGNESIUM ION T - 136
1p3j_A_1361p3j   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 136
1p3j_A_1361p3j   A     ZNZINC ION Y - 137
1p3j_A_1361p3j   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE Y - 137
1p3j_A_1361p3j   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE H - 138
1p3j_A_1361p3j   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE L - 139
1p3j_A_1361p3j   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE F - 141
1p3j_A_1361p3j   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE N - 142
1p3j_A_1361p3j   A     ZNZINC ION C - 150
1p3j_A_1361p3j   A     ZNZINC ION D - 151
1p3j_A_1361p3j   A     ZNZINC ION K - 152
1p3j_A_1361p3j   A     ZNZINC ION D - 153
1p3j_A_1361p3j   A     ZNZINC ION G - 154
1p3j_A_1361p3j   A     ZNZINC ION G - 155
1p3j_A_1361p3j   A     ZNZINC ION L - 157
1s3g_A_1361s3g   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE S - 136
1zin_*_1361zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE H - 142
1zin_*_1361zin   *     ZNZINC ION C - 153
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4y_A_1311e4y   A AC1AP5 BINDING SITE FOR CHAIN AY - 133
1e4y_A_1311e4y   A AC1AP5 BINDING SITE FOR CHAIN AH - 134
1e4y_A_1311e4y   A AC1AP5 BINDING SITE FOR CHAIN AF - 137
1e4y_A_1311e4y   A AC1AP5 BINDING SITE FOR CHAIN AN - 138

Clusters included in this Subclass
CLUSTER: AR.19.0