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Information on SUBCLASS 24.1.1
Subclass Accession number: 4337
Subclass: 24.1.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4.21 (>75 %)  3.4.21 (>75 %)  3.4.21.4 (>75 %)  3.4.21.4
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0004252 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0008236 (>75 %)  
SCOP : 50493 (>75 %)  50493 (>75 %)  50494 (>75 %)  50494 (>75 %)  50514 (>75 %)  50514 (>75 %)  
 Number of loops: 12

Average sequence ID (%) : 41.3 +/- 27.4
Average RMSD (Å) : 0.683 +/- 0.527

Consensus geometry
d (Å): 31 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: pLppXhphpXXVXXhXLPpXXhXhGpXh
(φψ)-conformation: bpabppppbaabbpbpppabppppgppb
Pattern: [ALM][LV][IL][HKQR][L][adks][ekqst][kprs][AIV][dkrst][fil][GNRST][adegpst]x[IV][AKQRS][iptv][AILV][ADGPS][LW][PQ][RST][astv][cdp][apv][adgps][astv][AG][PST]x[CTV][lty][ACIPTV][dst][GV]
Conservation:0.2730.9451.1560.4501.952-0.549-0.740-0.2710.160-0.787-0.400-0.435-1.236-1.1851.615-0.473-0.6680.272-0.6660.6272.195-0.016-0.784-0.851-0.602-0.967-0.5621.9180.275-1.3691.555-0.810-0.899-0.2611.138
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0j_A_1041a0j   A104138MLIKLSKPASLNSYVSTVALPSSCASSGTRCLVSGEEEEESS----BTTB---B--SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabxxxpvpxbbbbe
1azz_A_1041azz   A104138AVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTGEEEE-SS-----SSS---B--SS---TT-EEEEEEbbbxxwbpxxxbaabbxbxxxabxbxpgpxbbxbe
1bio_*_1041bio   -104138LLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVEEEEESS----BTTB----B--S-----TT-EEEEbbbxxabxxxxbaabbxbwbxaxxbpxxpvpxbbb
1bqy_A_1041bqy   A104138MLIKLDSSVSNSEHIAPLSLPSSPPSVGSVCRIMGEEEEESS----BTTB------SS---TT-EEEEEEbbbxxabpbbxbaabbxbxxxabwxxpgxxbbbbe
1f7z_A_1041f7z   A104138MLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGEEEEESS----SSSS---B--SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabxxxpgxxbbbbe
1fxy_A_1041fxy   A104138AVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGEEEEESS----BTTB------SS---TT-EEEEEEbbbbxabxxxxbaabbxxxxxabxxxpgpxbbbbe
1gvz_A_1041gvz   A104138MLLRLAQPARITDAVKILDLPTQEPKLGSTCYTSGEEEEESS----BTTB------SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabxxxpvxxbbbbe
1hj8_A_1041hj8   A104138MLIKLSKPATLNTYVQPVALPTSCAPAGTMCTVSGEEEEESS----SSS----B--SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabxxxpvxxbbbbe
1hj9_A_1041hj9   A104138MLIKLKSAASLNSRVASISLPTSCASAGTQCLISGEEEEESS----BTTB---B--SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabxxxpvxxbbbbe
1s83_A_1041s83   A104138MLIKLSSPATLNSRVATVSLPRSCAAAGTECLISGEEEEESS----SSSS---B--SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabxxxpvxxbbbbe
1ton_*_1041ton   -104138MLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGEEEEESS-----SS--------S---TT-EEEEEEbxbxxabpxxxbaabbxbxxxabxxxpvxxbbbbe
1trn_A_1041trn   A104138MLIKLSSRAVINARVSTISLPTAPPATGTKCLISGEEEEESS----SSSS---B--SS---TT-EEEEEEbbbxxabxxxxbaabbxbxxxabwwbpgpxbbbbe
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bio_*_1041bio   *     GOLGLYCEROL D - 129
1bio_*_1041bio   *     GOLGLYCEROL V - 130
1bio_*_1041bio   *     GOLGLYCEROL A - 131
1bio_*_1041bio   *     GOLGLYCEROL P - 132
1gvz_A_1041gvz   A     GOLGLYCEROL L - 121
1gvz_A_1041gvz   A     ACTACETATE ION L - 123
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hj9_A_1041hj9   A S41SO4 BINDING SITE FOR RESIDUE A247P - 124
1hj9_A_1041hj9   A S41SO4 BINDING SITE FOR RESIDUE A247T - 125

Clusters included in this Subclass
CLUSTER: AR.25.1