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Information on SUBCLASS 25.1.1
Subclass Accession number: 4340
Subclass: 25.1.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2 (>75 %)  1.2.1 (>75 %)  1.2.1 (>75 %)  1.2.1.12 (>75 %)  1.2.1.12
GO : GO:0008943 (>75 %)  GO:0008943 (>75 %)  GO:0016620 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)  GO:0016903 (>75 %)  
SCOP : 55346 (>75 %)  55346 (>75 %)  55347 (>75 %)  55347 (>75 %)  55348 (>75 %)  55348 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 69.7 +/- 7.7
Average RMSD (Å) : 0.250 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: HXYTNcQXhXDhhHpDLRRARXAXhphIP
(φψ)-conformation: bppbaapbabpbwbabaaaabpaaabpbw
Pattern: [ILV]x[DKRS][AG][LM][LM][T][T][V][H][AS][Y][T][N][DN][Q]x[ILV][LT][D][LV][PY][H][EK][D][L][R][R][A][R][AS][A][AT]x[NS][IM][I][P][T]
Conservation:-0.643-1.528-1.542-0.567-0.371-0.2550.5780.5780.0482.169-0.7321.6390.5781.109-0.1920.578-1.601-0.686-1.1531.109-0.732-0.9622.169-0.4621.1090.0480.5780.5780.0480.578-0.7320.048-0.893-1.608-0.518-0.6330.0481.6390.578
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cer_O_1671cer   O167205VEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTEEEEEEEEEEE--TTS-SSS---SSTTTTS-TTS--EEEbabbbbbbbbxxbaabxabpbwbabaaaabpaaabbbwb
1gd1_O_1671gd1   O167205IVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTEEEEEEEEEEE--TTSBSSS---SSTTTTSBTTTS-EEExabbbbbbxbxxbaaxbabpbwbaxaaaaxpaaabxbwb
1hdg_O_1671hdg   O167205IVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTEEEEEEEEEEE--TTSBSSS---SSTTTTSBGGG--EEEbabbbbbxxbxxbaaxbabpbpbaxaaaaxpaaabxbxb
1obf_O_1721obf   O172210LQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTEEEEEEEEEEE--TTS-SS----SSTTTTS-TTT--EEEbabbbbbbxbpxbaaxbabpbpbabaaaabpaaabxbwb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cer_O_1671cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 176
1cer_O_1671cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 179
1cer_O_1671cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 180
1cer_O_1671cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 186
1cer_O_1671cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 187
1cer_O_1671cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 188
1gd1_O_1671gd1   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 181
1gd1_O_1671gd1   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 185
1obf_O_1721obf   O     CSWCYSTEINE-S-DIOXIDE H - 181
1obf_O_1721obf   O     CSWCYSTEINE-S-DIOXIDE T - 184
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1obf_O_1721obf   O AC1CSW BINDING SITE FOR CHAIN OH - 181
1obf_O_1721obf   O AC2SO4 BINDING SITE FOR CHAIN OT - 184
1obf_O_1721obf   O AC4K BINDING SITE FOR CHAIN ON - 185
1obf_O_1721obf   O AC2SO4 BINDING SITE FOR CHAIN ON - 186
1obf_O_1721obf   O AC4K BINDING SITE FOR CHAIN OQ - 187
1obf_O_1721obf   O AC2SO4 BINDING SITE FOR CHAIN OR - 199

Clusters included in this Subclass
CLUSTER: AR.24.1