ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 32.1.1

Subclass Accession number: 4346
Subclass: 32.1.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 5.2 (>75 %)  5.2 (>75 %)  5.2.1 (>75 %)  5.2.1 (>75 %)  5.2.1.8 (>75 %)  5.2.1.8
GO : GO:0003755 (>75 %)  GO:0003755 (>75 %)  GO:0016853 (>75 %)  GO:0016853 (>75 %)  GO:0016859 (>75 %)  GO:0016859 (>75 %)
SCOP : 50890 (>75 %)  50890 (>75 %)  50891 (>75 %)  50891 (>75 %)  50892 (>75 %)  50892 (>75 %)

Number of loops: 9

Average sequence ID (%) : 70.1 +/- 19.6
Average RMSD (Å) : 0.300 +/- 0.071

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 0-45

rho (°): 180-225

Consensus Sequence:	QGGDFTpXcGTGGpSIYGXpFXDENFXhKHpXhGhh
(φψ)-conformation:	bbgpaaalagabebpaaeabbppabaapbpabplbb

Pattern:	[m]	[cil]	[q]	[g]	[g]	[d]	[fi]	[st]	[aknr]	x	[dn]	[g]	[st]	[g]	[g]	[ekmr]	[s]	[i]	[y]	[g]	[egr]	x	[f]	[adept]	[d]	[e]	[en]	[f]	x	x	[hk]	[h]	[dty]	[egkqr]	x	[fg]	[ilvw]	[lv]	[s]	[m]
Conservation:	0.641	-0.716	0.641	1.081	1.081	1.081	-0.169	-0.172	-1.145	-1.214	-0.016	1.081	-0.177	1.081	1.081	-0.999	0.201	0.201	1.520	1.081	-1.134	-1.216	1.081	-1.300	1.081	0.641	-0.129	1.081	-1.570	-1.189	-0.368	1.960	-1.201	-1.210	-1.383	-0.662	-1.036	-0.446	0.201	0.641

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a33_*_72	1a33	-	72	111	MIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSM	EEEE--TTTSSSS----TTSS-B----S-S---STTEEEE	bbbbvxaaavNgabebxaaMebbxxabaaxbxabxvxbbx
1cyn_A_69	1cyn	A	69	108	MIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSM	EEEE--TTTSSSS---BTTBS-B------S---STTEEEE	bbbbvxaaavagabebbaaeabbxxabaaxbxaepvxbbx
1h0p_A_85	1h0p	A	85	124	MIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSM	EEEE--TTTSSSS---BTTBS-B------S---STTEEEE	bbbbvxaaaUagabebxaaeabbxxabaabbxaepvbbbx
1ihg_A_81	1ihg	A	81	120	MIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSM	EEEE--TTTSSSS---BTTBS-B------B---STTEEEE	bbbbvxaaavNvabebxaaeabbxxabaaxxxabxvxbbx
1iip_A_81	1iip	A	81	120	MIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSM	EEEE--TTTSSSS----SSSS-B------B---STTEEEE	bbbbvxaaalNvabebxaaeabbxpabaabxxabxvxbbx
1ist_A_59	1ist	A	59	98	MLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSM	EEEE--TTTSSSS----TTSS-B------S---SSSEEEE	bbbbvxaaavagabebxaaeFxbxxabaaxbxabxvbxbx
1qng_A_68	1qng	A	68	107	MCQGGDITNGNGSGGESIYGRSFTDENFNMKHDQPGLLSM	EEEE--TTTSSSS---BTTBS-B------S---STTEEEE	bbbbvxaaalagabebbaaeabbpxabaaxbaabxvxbbx
2cpl_*_61	2cpl	-	61	100	MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSM	EEEE--TTTSSSS---BTTBS-B------S---STTEEEE	bbbbgxaaalNgabebxaaeabbxxabaaxbxaepvxbbx
2rmc_A_95	2rmc	A	95	134	MIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSM	EEEE---SSSSSS---BTTBS-B------S---STTEEEE	bbbbvxaaaUagaFebxaaeabbxxabaaxbxaexvxbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1cyn_A_69	1cyn	A	MLEN-METHYLLEUCINE	M - 69
1cyn_A_69	1cyn	A	MVAN-METHYLVALINE	M - 69
1cyn_A_69	1cyn	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	Q - 71
1cyn_A_69	1cyn	A	ABAALPHA-AMINOBUTYRIC ACID	Q - 71
1cyn_A_69	1cyn	A	SARSARCOSINE	Q - 71
1cyn_A_69	1cyn	A	MLEN-METHYLLEUCINE	Q - 71
1cyn_A_69	1cyn	A	MVAN-METHYLVALINE	Q - 71
1cyn_A_69	1cyn	A	SARSARCOSINE	D - 79
1cyn_A_69	1cyn	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	G - 80
1cyn_A_69	1cyn	A	ABAALPHA-AMINOBUTYRIC ACID	G - 80
1cyn_A_69	1cyn	A	SARSARCOSINE	G - 80
1cyn_A_69	1cyn	A	ABAALPHA-AMINOBUTYRIC ACID	T - 81
1cyn_A_69	1cyn	A	SARSARCOSINE	T - 81
1cyn_A_69	1cyn	A	ABAALPHA-AMINOBUTYRIC ACID	G - 82
1cyn_A_69	1cyn	A	ABAALPHA-AMINOBUTYRIC ACID	R - 90
1cyn_A_69	1cyn	A	MVAN-METHYLVALINE	M - 108
1h0p_A_85	1h0p	A	DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE	M - 85
1h0p_A_85	1h0p	A	DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE	Q - 87
1qng_A_68	1qng	A	MLEN-METHYLLEUCINE	M - 68
1qng_A_68	1qng	A	MVAN-METHYLVALINE	M - 68
1qng_A_68	1qng	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	Q - 70
1qng_A_68	1qng	A	ABAALPHA-AMINOBUTYRIC ACID	Q - 70
1qng_A_68	1qng	A	SARSARCOSINE	Q - 70
1qng_A_68	1qng	A	MLEN-METHYLLEUCINE	Q - 70
1qng_A_68	1qng	A	MVAN-METHYLVALINE	Q - 70
1qng_A_68	1qng	A	SARSARCOSINE	N - 78
1qng_A_68	1qng	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	G - 79
1qng_A_68	1qng	A	ABAALPHA-AMINOBUTYRIC ACID	G - 79
1qng_A_68	1qng	A	SARSARCOSINE	G - 79
1qng_A_68	1qng	A	ABAALPHA-AMINOBUTYRIC ACID	S - 80
1qng_A_68	1qng	A	SARSARCOSINE	S - 80
1qng_A_68	1qng	A	ABAALPHA-AMINOBUTYRIC ACID	G - 81
1qng_A_68	1qng	A	ABAALPHA-AMINOBUTYRIC ACID	R - 88
1qng_A_68	1qng	A	MVAN-METHYLVALINE	M - 107
2rmc_A_95	2rmc	A	MLEN-METHYLLEUCINE	M - 95
2rmc_A_95	2rmc	A	MVAN-METHYLVALINE	M - 95
2rmc_A_95	2rmc	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	Q - 97
2rmc_A_95	2rmc	A	ABAALPHA-AMINOBUTYRIC ACID	Q - 97
2rmc_A_95	2rmc	A	SARSARCOSINE	Q - 97
2rmc_A_95	2rmc	A	MLEN-METHYLLEUCINE	Q - 97
2rmc_A_95	2rmc	A	MVAN-METHYLVALINE	Q - 97
2rmc_A_95	2rmc	A	SARSARCOSINE	D - 105
2rmc_A_95	2rmc	A	BMT4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE	G - 106
2rmc_A_95	2rmc	A	ABAALPHA-AMINOBUTYRIC ACID	G - 106
2rmc_A_95	2rmc	A	SARSARCOSINE	G - 106
2rmc_A_95	2rmc	A	ABAALPHA-AMINOBUTYRIC ACID	T - 107
2rmc_A_95	2rmc	A	SARSARCOSINE	T - 107
2rmc_A_95	2rmc	A	ABAALPHA-AMINOBUTYRIC ACID	G - 108
2rmc_A_95	2rmc	A	MVAN-METHYLVALINE	M - 134

Clusters included in this Subclass

CLUSTER: AR.31.0