Information on SUBCLASS 1.1.7 |
Subclass Accession number: 4354
Subclass: 1.1.7 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 24 Average sequence ID (%) : 11.4 +/- 13.1 Average RMSD (Å) : 0.550 +/- 0.198 Consensus geometry
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Consensus Sequence: | XXpXp |
(φψ)-conformation: | aapaa |
Pattern: | x | x | x | [afilmtv] | x | [agkqrst] | [cdehnqrst] | [deknpqrs] | x | x | x | x | x |
Conservation: | -0.732 | -0.930 | -1.006 | 2.293 | 0.144 | 0.825 | 0.885 | 0.642 | 0.282 | -1.356 | -0.536 | -0.475 | -0.036 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b8a_A_124 | 1b8a | A | 124 | 136 | RFMDLRRPEVMAI | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
1cke_A_94 | 1cke | A | 100 | 112 | ASQVAAFPRVREA | HHHHTT-HHHHHH | aaaaaaxaaaaaa |
1ehy_A_151 | 1ehy | A | 152 | 164 | YSQFHQLDMAVEV | HHHHTT-HHHHHH | aaaaaaxaaaaaa |
1fxx_A_202 | 1fxx | A | 207 | 219 | YLFTHRNKHKLMA | HHHHT-SHHHHHH | aaaaaaxaaaaaa |
1g2i_A_72 | 1g2i | A | 73 | 85 | PERVRLNEKAVSI | HHHHTT-HHHHHH | aaaaaaxaaaaaa |
1iz0_A_244 | 1iz0 | A | 244 | 256 | LTPLLREGALVEE | HHHHTT-HHHHHH | aaaaaaxaaaaaa |
1j9m_A_154 | 1j9m | A | 161 | 173 | ASSAMKNSTFRTV | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
1jdh_A_208 | 1jdh | A | 218 | 230 | LHNLSHHREGLLA | HHHHTTSHHHHHH | aaaaaabaaaaaa |
1jdh_A_334 | 1jdh | A | 344 | 356 | LKVLSVCSSNKPA | HHHHTTSTTHHHH | aaaaaaxaaaaaa |
1jdh_A_566 | 1jdh | A | 577 | 589 | LHILARDVHNRIV | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
1jdh_A_608 | 1jdh | A | 618 | 630 | LCELAQDKEAAEA | HHHHTTSHHHHHH | aaaaaabaaaaaa |
1l0w_A_131 | 1l0w | A | 131 | 143 | RYLDLRRRRMQEN | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
1lqy_A_28 | 1lqy | A | 40 | 52 | YVKMSQDPELAAK | HHHHHTSHHHHHH | aaaaaabaaaaaa |
1m8z_A_1033 | 1m8z | A | 1033 | 1045 | TEQLVQDQYGNYV | HHHHTTSTTHHHH | aaaaaaxaaaaaa |
1m8z_A_1069 | 1m8z | A | 1069 | 1081 | VLVLSQHKFASNV | HHHHHTSTTHHHH | aaaaaaxaaaaaa |
1m8z_A_997 | 1m8z | A | 997 | 1009 | VFALSTHPYGCRV | HHHHHTSTTHHHH | aaaaaabaaaaaa |
1mdw_A_105 | 1mdw | A | 111 | 123 | IASLTLNEEILAR | HHHHTT-HHHHHH | aaaaaabaaaaaa |
1nm8_A_235 | 1nm8 | A | 242 | 254 | YNTLIKDKVNRDS | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
1oi4_A_97 | 1oi4 | A | 98 | 110 | PDYLRGDNRFVTF | HHHHTTSHHHHHH | aaaaaabaaaaaa |
1oj6_A_52 | 1oj6 | A | 52 | 64 | PEDSLSSPEFLDH | HHHHTT-HHHHHH | aaaaaaxaaaaaa |
1poi_A_259 | 1poi | A | 265 | 277 | YDKVSKTQEDFDA | HHHHTTSHHHHHH | aaaaaabaaaaaa |
1r5l_A_129 | 1r5l | A | 140 | 152 | SELIVQEVETQRN | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
1uuz_A_6 | 1uuz | A | 6 | 18 | LFELLGQPGYKAT | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
3mbp_*_305 | 3mbp | - | 308 | 320 | EEELAKDPRIAAT | HHHHTTSHHHHHH | aaaaaaxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oj6_A_52 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | H - 64 |
1oj6_A_52 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | K - 67 |
1oj6_A_52 | 1oj6 | A | AC2HEM BINDING SITE FOR CHAIN B | T - 77 |
Clusters included in this Subclass |
CLUSTER: HH.2.20 |
CLUSTER: HH.3.16 |
CLUSTER: HH.4.10 |
CLUSTER: HH.4.139 |