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PDB code:

Information on SUBCLASS 1.1.13

Subclass Accession number: 4360 Subclass: 1.1.13 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 10 Average sequence ID (%) : 30.8 +/- 38.1 Average RMSD (Å) : 0.450 +/- 0.190 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
174l_A_60	174l	A	75	89	VRGILRNAKLKPVYD	HHHHHT-TTTHHHHH	aaaaaabaaaaaaaa
189l_*_63	189l	-	75	89	VRGILRNPKLKPVYD	HHHHHH-TTTHHHHH	aaaaaaxaaaaaaaa
1f3v_A_28	1f3v	A	28	42	LSDAYAHPQQKVAVY	HHHHHH-TTTHHHHH	aaaaaaxaaaaaaaa
1gpq_A_6	1gpq	A	6	20	ISSLAKGETTKAAFN	HHHHHH-TTTHHHHH	aaaaaaxaaaaaaaa
1jtm_A_60	1jtm	A	75	89	VRGILRNAKLKPVYD	HHHHHH-TTHHHHHH	aaaaaaxaaaaaaaa
1l74_*_60	1l74	-	75	89	VRGILRNAKLKPVYD	HHHHHH-TTTHHHHH	aaaaaaxaaaaaaaa
1m8z_A_961	1m8z	A	961	975	VLKCVKDQNGNHVVQ	HHHHHHSTTHHHHHH	aaaaaaxaaaaaaaa
1pb7_A_180	1pb7	A	182	196	DIYFRRQVELSTMYR	HHHHHT-GGGHHHHH	aaaaaabaaaaaaaa
1pqm_A_61	1pqm	A	75	89	VRGILRNAKLKPVYD	HHHHHHH-TTHHHHH	aaaaaaxaaaaaaaa
1q35_A_198	1q35	A	200	214	YGKMLDDEKQKSWAE	HHHHHHSTTTHHHHH	aaaaaabaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1l74_*_60	1l74	*	SEO2-MERCAPTOETHANOL	V - 71
1l74_*_60	1l74	*	SEO2-MERCAPTOETHANOL	V - 75
1l74_*_60	1l74	*	SEO2-MERCAPTOETHANOL	Y - 88
1pb7_A_180	1pb7	A	GLYGLYCINE	S - 180
1pb7_A_180	1pb7	A	GLYGLYCINE	V - 181
1pqm_A_61	1pqm	A	HED2-HYDROXYETHYL DISULFIDE	N - 68
1pqm_A_61	1pqm	A	HED2-HYDROXYETHYL DISULFIDE	V - 71
1pqm_A_61	1pqm	A	HED2-HYDROXYETHYL DISULFIDE	D - 72
1pqm_A_61	1pqm	A	HED2-HYDROXYETHYL DISULFIDE	V - 75
1pqm_A_61	1pqm	A	HED2-HYDROXYETHYL DISULFIDE	R - 76
1q35_A_198	1q35	A	FMTFORMIC ACID	Y - 198
1q35_A_198	1q35	A	FMTFORMIC ACID	Y - 199

Clusters included in this Subclass

CLUSTER: HH.4.36

CLUSTER: HH.5.58

CLUSTER: HH.6.232

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