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Information on SUBCLASS 1.1.19
Subclass Accession number: 4366
Subclass: 1.1.19 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 6.8 +/- 10.3
Average RMSD (Å) : 0.643 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXpXp
(φψ)-conformation: aapaa
Pattern: xxxx[anqst]x[agptv][EKNQSY]x[aglpv][ADGPS][egkt][fhil]x
Conservation:-0.8090.027-1.7400.4350.8540.596-0.5291.5580.208-1.4381.453-0.3230.549-0.842
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e5m_A_1371e5m   A137150MIPMMIANMASGLTHHHHHSTTHHHHHHaaaaapaaaaaaaa
1gu7_A_2451gu7   A245258EDQNNSREFGPTIKHHHHH-GGGHHHHHaaaaaxaaaaaaaa
1ig8_A_3001ig8   A301314FEKMSSGYYLGEILHHHHH-GGGHHHHHaaaaaxaaaaaaaa
1kas_*_1331kas   -133146FVPSTIVNMVAGHLHHHHHSTTHHHHHHaaaaaxaaaaaaaa
1knz_A_791knz   A8598RNWLADTSRPAKLDHHHHH-TTHHHHHHaaaaapaaaaaaaa
1mba_*_511mba   -5265ADIKASPKLRDVSSHHHHT-TTHHHHHHaaaaaxaaaaaaaa
1ohw_A_821ohw   A8598VKLVQQPQNVSTFIHHHHH-GGGHHHHHaaaaaxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gu7_A_2451gu7   A     GOLGLYCEROL K - 258
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 63
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 66
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 67
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 68
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 70
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 71
1mba_*_511mba   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 74

Clusters included in this Subclass
CLUSTER: HH.3.331
CLUSTER: HH.4.109