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Information on SUBCLASS 1.1.27
Subclass Accession number: 4374
Subclass: 1.1.27 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 6.2 +/- 11.3
Average RMSD (Å) : 0.775 +/- 0.150

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: hppph
(φψ)-conformation: aapaa
Pattern: [APQ]xx[AKL]xxx[ERST][DST][ENS][FKLV][AFV][KQR][APQS]x[ALVY]
Conservation:0.329-1.017-0.689-0.129-0.607-1.181-0.5260.1301.2171.518-0.6890.1462.5010.048-0.853-0.198
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1apx_A_2061apx   A206221PSDKALLTDSVFRPLVHHHHTTTS-TTHHHHHaaaaaaaaxaaaaaaa
1csh_*_1371csh   -144159AITALNSESNFARAYAHHHHGGGG-HHHHHHHaaaaaaaapaaaaaaa
1r4w_A_1491r4w   A153168QHLLNKISTELVKSKLHHHHTTTTSHHHHHHHaaaaaaaapaaaaaaa
1uuq_A_1621uuq   A167182AKSASFYRSEKAQQEYHHHHGGGG-HHHHHHHaaaaaaaaxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1apx_A_2061apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 207
1uuq_A_1621uuq   A     GOLGLYCEROL R - 174
1uuq_A_1621uuq   A     GOLGLYCEROL S - 175
1uuq_A_1621uuq   A     GOLGLYCEROL E - 176
1uuq_A_1621uuq   A     GOLGLYCEROL K - 177
1uuq_A_1621uuq   A     GOLGLYCEROL A - 178
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uuq_A_1621uuq   A AC2GOL BINDING SITE FOR CHAIN AR - 174
1uuq_A_1621uuq   A AC2GOL BINDING SITE FOR CHAIN AS - 175
1uuq_A_1621uuq   A AC2GOL BINDING SITE FOR CHAIN AE - 176
1uuq_A_1621uuq   A AC2GOL BINDING SITE FOR CHAIN AK - 177

Clusters included in this Subclass
CLUSTER: HH.6.124