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Information on SUBCLASS 1.1.29
Subclass Accession number: 4376
Subclass: 1.1.29 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 37.3 +/- 30.6
Average RMSD (Å) : 0.475 +/- 0.287

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hTphp
(φψ)-conformation: aapaa
Pattern: [ADE][AILM][iv][AL][AM][T][DH][LMP][KSY][FK][HQ][FMQ][DNSV][fl][AL][A][DE]
Conservation:-0.382-0.514-0.704-0.259-0.1572.1960.728-0.628-0.834-0.4541.340-0.628-1.111-1.061-0.2591.4611.265
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0j_A_3281f0j   A340356DMVLATDMSKHMSLLADHHHHTT-GGGHHHHHHHaaaaaaxaaaaaaaaaa
1m2r_A_3151m2r   A315331ALEAMTHPYFQQVRAAEHHHHHTSGGGHHHHHHHaaaaaaxaaaaaaaaaa
1oyn_A_2541oyn   A266282DIVLATDMSKHMNLLADHHHHTTSGGGHHHHHHHaaaaaaxaaaaaaaaaa
1so2_A_8761so2   A888904EAILATDLKKHFDFLAEHHHHTT-GGGHHHHHHHaaaaaaxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f0j_A_3281f0j   A     ZNZINC ION T - 345
1f0j_A_3281f0j   A     MGMAGNESIUM ION T - 345
1f0j_A_3281f0j   A     ARSARSENIC T - 345
1f0j_A_3281f0j   A     ARSARSENIC M - 347
1oyn_A_2541oyn   A     ZNZINC ION T - 271
1oyn_A_2541oyn   A     ROLROLIPRAM M - 273
1so2_A_8761so2   A     MGMAGNESIUM ION T - 893
1so2_A_8761so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE L - 895

Clusters included in this Subclass
CLUSTER: HH.5.213