Information on SUBCLASS 1.1.42 |
Subclass Accession number: 4389
Subclass: 1.1.42 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.1 +/- 10.1 Average RMSD (Å) : 0.700 +/- 0.200 Consensus geometry
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Consensus Sequence: | hXXXX |
(φψ)-conformation: | aapaa |
Pattern: | x | [AV] | [AFY] | [AFL] | [NS] | x | [AMY] | [GKR] | x | x | x | [HIY] | x | [DEQ] |
Conservation: | -0.312 | 1.060 | 0.302 | -0.773 | 1.981 | -0.220 | -0.773 | -0.159 | -1.387 | -1.233 | -0.312 | 0.302 | -0.159 | 1.684 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
189l_*_126 | 189l | - | 128 | 141 | EAAANLAKSRWYNQ | HHHHHHTTSSHHHH | aaaaaaaapaaaaa |
1f3l_A_215 | 1f3l | A | 215 | 228 | GVYFSSYGHYGIHE | HHHHHHTSSSHHHH | aaaaaaaaxaaaaa |
1uiu_A_405 | 1uiu | A | 405 | 418 | HAFLSSMRVPSHAD | HHHHHHTT-TTSHH | aaaaaaaaxaabaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f3l_A_215 | 1f3l | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Y - 217 |
1f3l_A_215 | 1f3l | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 218 |
1f3l_A_215 | 1f3l | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Y - 221 |
1f3l_A_215 | 1f3l | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | H - 227 |
1f3l_A_215 | 1f3l | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | M - 230 |
1f3l_A_215 | 1f3l | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 231 |
Clusters included in this Subclass |
CLUSTER: HH.5.330 |