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Information on SUBCLASS 1.1.42
Subclass Accession number: 4389
Subclass: 1.1.42 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.1 +/- 10.1
Average RMSD (Å) : 0.700 +/- 0.200

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: hXXXX
(φψ)-conformation: aapaa
Pattern: x[AV][AFY][AFL][NS]x[AMY][GKR]xxx[HIY]x[DEQ]
Conservation:-0.3121.0600.302-0.7731.981-0.220-0.773-0.159-1.387-1.233-0.3120.302-0.1591.684
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
189l_*_126189l   -128141EAAANLAKSRWYNQHHHHHHTTSSHHHHaaaaaaaapaaaaa
1f3l_A_2151f3l   A215228GVYFSSYGHYGIHEHHHHHHTSSSHHHHaaaaaaaaxaaaaa
1uiu_A_4051uiu   A405418HAFLSSMRVPSHADHHHHHHTT-TTSHHaaaaaaaaxaabaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 217
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 218
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 221
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE H - 227
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 230
1f3l_A_2151f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 231

Clusters included in this Subclass
CLUSTER: HH.5.330