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Information on SUBCLASS 1.1.49
Subclass Accession number: 4396
Subclass: 1.1.49 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.4 +/- 14.7
Average RMSD (Å) : 0.667 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: LXXhh
(φψ)-conformation: aapaa
Pattern: [KS]x[FIL]xx[QSY][L]x[GT][AP][CP]xx[AEK]x[AIL][AW][EFM]xx[FT][AET][EG][ILW][KL][AIT]
Conservation:1.353-0.4900.663-1.130-1.130-0.3622.9690.4840.5860.7691.458-0.746-0.874-0.105-1.258-0.1050.279-0.874-1.258-0.8740.586-0.3620.9290.023-0.041-0.490
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ihu_A_991ihu   A103128SSINEQLSGACTTEIAAFDEFTGLLTHHHHHHTSSHHHHHHHHHHHHHHHHHaaaaaaaaxaaaaaaaaaaaaaaaaa
1izo_A_891izo   A96121KMLFLSLMTPPHQKRLAELMTEEWKAHHHHHHTSSHHHHHHHHHHHHHHHHHaaaaaaaaxaaaaaaaaaaaaaaaaa
1jb0_J_21jb0   J227KHFLTYLSTAPVLAAIWMTITAGILIHHHHHHTTSHHHHHHHHHHHHHHHHHaaaaaaaaxaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihu_A_991ihu   A     CDCADMIUM ION E - 107
1ihu_A_991ihu   A     CDCADMIUM ION Q - 108
1ihu_A_991ihu   A     CDCADMIUM ION S - 110
1ihu_A_991ihu   A     CDCADMIUM ION G - 111
1ihu_A_991ihu   A     CDCADMIUM ION A - 112
1ihu_A_991ihu   A     CDCADMIUM ION C - 113
1ihu_A_991ihu   A     CDCADMIUM ION T - 114
1izo_A_891izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 92
1izo_A_891izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 96
1izo_A_891izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 99
1izo_A_891izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 102
1izo_A_891izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 103
1izo_A_891izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 111
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A F - 4
1jb0_J_21jb0   J     CACALCIUM ION Y - 7
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A Y - 7
1jb0_J_21jb0   J     BCRBETA-CAROTENE Y - 7
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A L - 8
1jb0_J_21jb0   J     CACALCIUM ION T - 10
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A T - 10
1jb0_J_21jb0   J     BCRBETA-CAROTENE T - 10
1jb0_J_21jb0   J     CACALCIUM ION A - 11
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A A - 11
1jb0_J_21jb0   J     CACALCIUM ION P - 12
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A P - 12
1jb0_J_21jb0   J     BCRBETA-CAROTENE P - 12
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A V - 13
1jb0_J_21jb0   J     BCRBETA-CAROTENE V - 13
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A L - 14
1jb0_J_21jb0   J     BCRBETA-CAROTENE L - 14
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A A - 15
1jb0_J_21jb0   J     PQNPHYLLOQUINONE A - 15
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A A - 16
1jb0_J_21jb0   J     BCRBETA-CAROTENE A - 16
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A I - 17
1jb0_J_21jb0   J     CACALCIUM ION W - 18
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A W - 18
1jb0_J_21jb0   J     CACALCIUM ION M - 19
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A M - 19
1jb0_J_21jb0   J     PQNPHYLLOQUINONE M - 19
1jb0_J_21jb0   J     BCRBETA-CAROTENE M - 19
1jb0_J_21jb0   J     CACALCIUM ION T - 20
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A T - 20
1jb0_J_21jb0   J     BCRBETA-CAROTENE T - 20
1jb0_J_21jb0   J     CACALCIUM ION I - 21
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A I - 21
1jb0_J_21jb0   J     BCRBETA-CAROTENE I - 21
1jb0_J_21jb0   J     CACALCIUM ION T - 22
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A T - 22
1jb0_J_21jb0   J     BCRBETA-CAROTENE T - 22
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A A - 23
1jb0_J_21jb0   J     BCRBETA-CAROTENE A - 23
1jb0_J_21jb0   J     CACALCIUM ION G - 24
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A G - 24
1jb0_J_21jb0   J     BCRBETA-CAROTENE G - 24
1jb0_J_21jb0   J     CACALCIUM ION I - 25
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A I - 25
1jb0_J_21jb0   J     CACALCIUM ION L - 26
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A L - 26
1jb0_J_21jb0   J     BCRBETA-CAROTENE L - 26
1jb0_J_21jb0   J     CACALCIUM ION I - 27
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A I - 27
1jb0_J_21jb0   J     BCRBETA-CAROTENE I - 27
1jb0_J_21jb0   J     CACALCIUM ION E - 28
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A E - 28
1jb0_J_21jb0   J     BCRBETA-CAROTENE E - 28
1jb0_J_21jb0   J     CACALCIUM ION F - 29
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A F - 29
1jb0_J_21jb0   J     BCRBETA-CAROTENE F - 29
1jb0_J_21jb0   J     CACALCIUM ION N - 30
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A N - 30
1jb0_J_21jb0   J     BCRBETA-CAROTENE N - 30
1jb0_J_21jb0   J     CACALCIUM ION R - 31
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A R - 31
1jb0_J_21jb0   J     BCRBETA-CAROTENE R - 31
1jb0_J_21jb0   J     CACALCIUM ION F - 32
1jb0_J_21jb0   J     CL1ALPHA CHLOROPHYLL A F - 32

Clusters included in this Subclass
CLUSTER: HH.4.275