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Information on SUBCLASS 1.1.55
Subclass Accession number: 4402
Subclass: 1.1.55 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004553 (>50 %)  GO:0016798 (>50 %)  
SCOP : 51988 (>50 %)  51989 (>50 %)  51990 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 20.5 +/- 34.0
Average RMSD (Å) : 0.433 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXXXX
(φψ)-conformation: aapaa
Pattern: [AQ][HN][ALM][LV][TW]xx[GNQ][CTV][PR][FK][CV][AKS]
Conservation:-0.3042.221-0.6510.6240.738-0.845-0.909-0.651-0.5220.316-0.8371.469-0.651
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jd5_A_2791jd5   A282294QHALWLSQCRFVKHHHHH-TT-HHHHaaaaaaaapaaaa
1oc7_A_2291oc7   A229241ANMVTNMNVPKCSHHHHH-TTSHHHHaaaaaaaaxaaaa
1qjw_A_2231qjw   A224236ANLVTNLGTPKCAHHHHH-TTSHHHHaaaaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jd5_A_2791jd5   A     ZNZINC ION H - 283
1jd5_A_2791jd5   A     ZNZINC ION L - 287
1jd5_A_2791jd5   A     ZNZINC ION C - 290
1jd5_A_2791jd5   A     ZNZINC ION R - 291
1jd5_A_2791jd5   A     ZNZINC ION F - 292
1jd5_A_2791jd5   A     ZNZINC ION V - 293
1oc7_A_2291oc7   A     SGC4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE N - 230
1oc7_A_2291oc7   A     SGC4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE T - 233
1oc7_A_2291oc7   A     MA3O1-METHYL-4-DEOXY-4-THIO-ALPHA-D-GLUCOSE T - 233
1oc7_A_2291oc7   A     SGC4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE N - 234
1qjw_A_2231qjw   A     MGLO1-METHYL-GLUCOSE N - 225
1qjw_A_2231qjw   A     SGC4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE N - 225
1qjw_A_2231qjw   A     MGLO1-METHYL-GLUCOSE T - 228
1qjw_A_2231qjw   A     MGLO1-METHYL-GLUCOSE N - 229
1qjw_A_2231qjw   A     SGC4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE N - 229
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oc7_A_2291oc7   A SG2SGC BINDING SITE FOR CHAIN AN - 234

Clusters included in this Subclass
CLUSTER: HH.3.290