Information on SUBCLASS 1.2.18 |
Subclass Accession number: 4436
Subclass: 1.2.18 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 18.1 +/- 20.0 Average RMSD (Å) : 0.420 +/- 0.130 Consensus geometry
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Consensus Sequence: | XhpXX |
(φψ)-conformation: | aabaa |
Pattern: | [LMT] | [ATV] | x | [aimv] | [ALY] | x | x | [AFWY] | [AKRS] | [DNPQ] | x | x | [KPS] | [aftv] | [FLY] | [AR] |
Conservation: | 1.104 | 0.492 | -1.140 | -0.565 | -0.393 | -1.204 | -0.873 | -0.187 | 0.297 | 0.068 | -0.234 | -0.031 | 1.253 | -1.710 | 1.557 | 1.566 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1clc_*_296 | 1clc | - | 306 | 321 | TAMAARIFRPYDPQYA | HHHHHHHHTTT-HHHH | aaaaaaaaaaabaaaa |
1ia6_A_152 | 1ia6 | A | 162 | 177 | LTLMYLNYKNIDSAYA | HHHHHHHHTTT-HHHH | aaaaaaaaaaabaaaa |
1ile_*_738 | 1ile | - | 747 | 762 | LVLVATLAAPFTPFLA | HHHHHHHHTTTSTTHH | aaaaaaaaaaabaaaa |
1pvy_A_71 | 1pvy | A | 71 | 86 | MVDILEFASQKFKVLR | HHHHHHHHTTT-HHHH | aaaaaaaaaaabaaaa |
1ut9_A_494 | 1ut9 | A | 504 | 519 | LAQSARLWKDYDPTFA | HHHHHHHHTTT-HHHH | aaaaaaaaaaabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1clc_*_296 | 1clc | * | CACALCIUM ION | A - 297 |
1ia6_A_152 | 1ia6 | A | CACALCIUM ION | D - 153 |
Clusters included in this Subclass |
CLUSTER: HH.5.77 |