Information on SUBCLASS 1.2.23 |
Subclass Accession number: 4441
Subclass: 1.2.23 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 38.1 +/- 28.6 Average RMSD (Å) : 0.275 +/- 0.150 Consensus geometry
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Consensus Sequence: | hXpPc |
(φψ)-conformation: | aabaa |
Pattern: | [EN] | [DKN] | x | [LM] | x | x | [KY] | [AL] | x | [NY] | [P] | [DK] | [IK] | [VY] |
Conservation: | 0.442 | -0.112 | -0.763 | 0.677 | -1.024 | -0.640 | 0.174 | -0.332 | -1.173 | 0.107 | 2.862 | 0.070 | -0.658 | 0.370 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ccr_*_69 | 1ccr | - | 69 | 82 | ENTLYDYLLNPKKY | HHHHHHHHH-HHHH | aaaaaaaaabaaaa |
1n83_A_466 | 1n83 | A | 486 | 499 | EKLMAFKAIYPDIV | HHHHHHHHH-HHHH | aaaaaaaaabaaaa |
1ycc_*_61 | 1ycc | - | 61 | 74 | ENNMSEYLTNPKKY | HHHHHHHHH-HHHH | aaaaaaaaabaaaa |
5cyt_R_61 | 5cyt | R | 61 | 74 | NDTLMEYLENPKKY | HHHHHHHHH-HHHH | aaaaaaaaabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ccr_*_69 | 1ccr | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 72 |
1ccr_*_69 | 1ccr | * | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 75 |
1ccr_*_69 | 1ccr | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 76 |
1ccr_*_69 | 1ccr | * | TMLMETHYL PART OF N-TRIMETHYLLYSINE | L - 77 |
1ccr_*_69 | 1ccr | * | TMLMETHYL PART OF N-TRIMETHYLLYSINE | N - 78 |
1ccr_*_69 | 1ccr | * | TMLMETHYL PART OF N-TRIMETHYLLYSINE | K - 80 |
1ccr_*_69 | 1ccr | * | TMLMETHYL PART OF N-TRIMETHYLLYSINE | K - 81 |
1n83_A_466 | 1n83 | A | CLRCHOLESTEROL | H - 484 |
1n83_A_466 | 1n83 | A | CLRCHOLESTEROL | K - 487 |
1ycc_*_61 | 1ycc | * | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 64 |
1ycc_*_61 | 1ycc | * | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 67 |
1ycc_*_61 | 1ycc | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 68 |
1ycc_*_61 | 1ycc | * | TMLMETHYL PART OF N-TRIMETHYLLYSINE | K - 72 |
5cyt_R_61 | 5cyt | R | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 64 |
Clusters included in this Subclass |
CLUSTER: HH.0.43 |