|
|
|
|
|
|
|
| Information on SUBCLASS 1.2.27 |
|
Subclass Accession number: 4445
Subclass: 1.2.27 
Type: HH alpha-alpha DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 7.4 +/- 11.2 Average RMSD (Å) : 0.700 +/- 0.100 Consensus geometry
|
| Consensus Sequence: | XppXX |
| (φψ)-conformation: | aabaa |
| Pattern: | [AEL] | x | [AGV] | [AEL] | x | [IKV] | x | [AG] | [FPT] | [DHY] | [DHN] | [EKP] | x | [GLV] | x | [NQ] | x | x |
| Conservation: | -0.843 | -0.715 | -0.200 | -0.843 | -0.458 | -0.072 | 0.390 | 1.581 | -0.715 | 0.958 | 1.601 | 0.700 | -0.843 | -0.972 | -0.586 | 2.114 | -1.101 | 0.005 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1nk4_A_558 | 1nk4 | A | 558 | 575 | ADVLEKLAPYHEIVENIL | HHHHHHHGGG-HHHHHHH | aaaaaaaaaabaaaaaaa |
| 1qcz_A_123 | 1qcz | A | 131 | 148 | LLAAQILATHDKELHQRL | HHHHHHHHTT-HHHHHHH | aaaaaaaaaabaaaaaaa |
| 1ypr_A_39 | 1ypr | A | 41 | 58 | EIGEIVQGFDNPAGLQSN | HHHHHHHHTT-THHHHHH | aaaaaaaaaabaaaaaaa |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1qcz_A_123 | 1qcz | A | MSESELENOMETHIONINE | A - 126 |
| 1qcz_A_123 | 1qcz | A | MSESELENOMETHIONINE | A - 129 |
| Clusters included in this Subclass |
| CLUSTER: HH.4.128 |
| For any comment or web-related incidence, send an email to the webmaster. |
|