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Information on SUBCLASS 1.2.35
Subclass Accession number: 4453
Subclass: 1.2.35 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 8.3 +/- 9.3
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: ppppX
(φψ)-conformation: aabaa
Pattern: [EL]xxx[ER][FKY][ALM][EKN][HNR][DRS][NRT]x[HLY][EQR]x[AM]
Conservation:-0.269-1.386-1.224-0.1371.8000.067-0.0940.7131.197-0.7400.067-0.9010.2291.197-1.5471.026
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jqe_A_141jqe   A1732ESFRRFLNHSTEHQCMHHHHHHHHTBSHHHHHaaaaaaaaabaaaaaa
1mtz_A_1901mtz   A193208LKSLEYAERRNVYRIMHHHHHHHHHSSHHHHHaaaaaaaaaxaaaaaa
1uc2_A_321uc2   A3247EVLLEKMKNDRTLEQAHHHHHHHHSSSHHHHHaaaaaaaaabaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jqe_A_141jqe   A     QUNQUINACRINE Y - 15
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 16
1jqe_A_141jqe   A     QUNQUINACRINE V - 16
1jqe_A_141jqe   A     QUNQUINACRINE E - 17
1jqe_A_141jqe   A     QUNQUINACRINE S - 18
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 19
1jqe_A_141jqe   A     QUNQUINACRINE F - 19
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 23
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 28
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE H - 29
1jqe_A_141jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 32

Clusters included in this Subclass
CLUSTER: HH.2.138