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Information on SUBCLASS 1.2.42
Subclass Accession number: 4460
Subclass: 1.2.42 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 21.4 +/- 0.0
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: TXppE
(φψ)-conformation: aabaa
Pattern: [AL][AC][AR][IW][AQ][S][LM][T]x[NS][EN][E][IV][LM]
Conservation:-1.1840.249-0.979-0.570-0.9790.8630.2491.681-1.5930.044-0.1611.6810.4530.249
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aru_*_2561aru   -256269ACRWQSMTSSNEVMHHHHHHTSS-HHHHaaaaaaaaabaaaa
1kfu_L_1051kfu   L108121LAAIASLTLNEEILHHHHHHTTS-HHHHaaaaaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aru_*_2561aru   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 273
1aru_*_2561aru   *     CACALCIUM ION Y - 273
1aru_*_2561aru   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 277
1aru_*_2561aru   *     CACALCIUM ION M - 277
1aru_*_2561aru   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 280
1aru_*_2561aru   *     CACALCIUM ION M - 280

Clusters included in this Subclass
CLUSTER: HH.3.256