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PDB code:

Information on SUBCLASS 1.3.5

Subclass Accession number: 4466 Subclass: 1.3.5 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 26 Average sequence ID (%) : 10.7 +/- 14.3 Average RMSD (Å) : 0.512 +/- 0.190 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1d3y_A_199	1d3y	A	203	213	ARLNAERFWDK	HHHHHTTHHHH	aaaaaalaaaa
1dpe_*_113	1dpe	-	113	123	EYFEGMGLPEL	HHHHHTTHHHH	aaaaaavaaaa
1ee4_A_331	1ee4	A	335	345	QVVINAGVLPA	HHHHHTTHHHH	aaaaaavaaaa
1ejx_C_1494	1ejx	C	1494	1504	QAAAANGVAER	HHHHHTTHHHH	aaaaaavaaaa
1f0j_A_191	1f0j	A	198	208	AIFQERDLLKT	HHHHHTTHHHH	aaaaaalaaaa
1ffv_B_440	1ffv	B	446	456	KVLDAVDYPAL	HHHHHHTHHHH	aaaaaalaaaa
1fp2_A_27	1fp2	A	34	44	KWAVEMNIPNI	HHHHHTTHHHH	aaaaaavaaaa
1gqe_A_6	1gqe	A	20	30	VLRGYLDYDAK	HHHHHTTHHHH	aaaaaalaaaa
1gso_A_73	1gso	A	73	83	EAPLVKGVVDT	HHHHHTTHHHH	aaaaaavaaaa
1ih7_A_312	1ih7	A	333	343	QIDAKRQFINL	HHHHHH-HHHH	aaaaaalaaaa
1jmx_A_423	1jmx	A	423	433	ERAVEDEDVKF	HHHHHTTHHHH	aaaaaalaaaa
1kfi_A_542	1kfi	A	552	562	LGLEISDIAQF	HHHHHH-HHHH	aaaaaalaaaa
1kiy_A_177	1kiy	A	181	191	LRRMNGLGHCV	HHHHHH-HHHH	aaaaaavaaaa
1l3a_A_224	1l3a	A	237	247	VMPYLLGWHTA	HHHHHTTHHHH	aaaaaavaaaa
1l3a_C_224	1l3a	C	237	247	VMPYLLGWHTA	HHHHHHTHHHH	aaaaaavaaaa
1lw3_A_525	1lw3	A	526	536	QQRGKENLPKR	HHHHHTTHHHH	aaaaaalaaaa
1mhc_A_138	1mhc	A	145	155	SRLESAGTAEY	HHHHHH-THHH	aaaaaavaaaa
1mnz_A_324	1mnz	A	328	338	EALRASRLDEL	HHHHHTTHHHH	aaaaaavaaaa
1nrj_A_96	1nrj	A	111	121	KLWNSLHLSES	HHHHHTTHHHH	aaaaaalaaaa
1ohw_A_358	1ohw	A	369	379	NIIKREDLLSN	HHHHHTTHHHH	aaaaaalaaaa
1q1s_C_152	1q1s	C	156	166	KAVVDGGAIPA	HHHHHTTHHHH	aaaaaavaaaa
1so2_A_695	1so2	A	702	712	TLFQDTGLLEI	HHHHHTTHHHH	aaaaaavaaaa
2cev_A_23	2cev	A	25	35	SAMRYAGVIER	HHHHHTTHHHH	aaaaaavaaaa
2dkb_*_308	2dkb	-	319	329	DVVQRDGLVAR	HHHHHTTHHHH	aaaaaavaaaa
2oat_A_327	2oat	A	338	348	EVLEEENLAEN	HHHHHTTHHHH	aaaaaalaaaa
3pmg_A_531	3pmg	A	541	551	IALKVSQLQER	HHHHHHTHHHH	aaaaaalaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dpe_*_113	1dpe	*	CDCADMIUM ION	E - 116
1f0j_A_191	1f0j	A	ARSARSENIC	T - 193
1f0j_A_191	1f0j	A	ARSARSENIC	C - 194
1f0j_A_191	1f0j	A	ARSARSENIC	I - 195
1f0j_A_191	1f0j	A	ARSARSENIC	Y - 197
1f0j_A_191	1f0j	A	ARSARSENIC	A - 198
1gqe_A_6	1gqe	A	MSESELENOMETHIONINE	L - 14
1gqe_A_6	1gqe	A	MSESELENOMETHIONINE	S - 18
1gqe_A_6	1gqe	A	MSESELENOMETHIONINE	R - 22
1gqe_A_6	1gqe	A	MSESELENOMETHIONINE	Y - 24
1kiy_A_177	1kiy	A	EDO1,2-ETHANEDIOL	G - 186
1kiy_A_177	1kiy	A	EDO1,2-ETHANEDIOL	L - 187
1kiy_A_177	1kiy	A	EDO1,2-ETHANEDIOL	V - 191

Clusters included in this Subclass

CLUSTER: HH.1.117

CLUSTER: HH.1.25

CLUSTER: HH.2.80

CLUSTER: HH.3.164

CLUSTER: HH.3.196

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