Information on SUBCLASS 1.3.8 |
Subclass Accession number: 4469
Subclass: 1.3.8 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 9.6 +/- 13.3 Average RMSD (Å) : 0.600 +/- 0.250 Consensus geometry
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Consensus Sequence: | XXXXX |
(φψ)-conformation: | aalaa |
Pattern: | [afilvy] | x | x | x | [flmy] | x | [adekt] | [iklmt] | [egkn] | x | x | [ehnqrs] | x | [FKLV] | [DEGKS] | x | x |
Conservation: | 0.300 | -1.391 | -0.802 | -0.936 | 1.752 | 0.537 | 0.343 | -0.243 | 0.142 | 0.159 | -0.732 | 0.799 | -0.172 | 0.978 | 1.808 | -1.601 | -0.941 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b0x_A_916 | 1b0x | A | 916 | 932 | VGDWLQAIKMDRYKDNF | HHHHHHHTT-GGGHHHH | aaaaaaaalaaaaaaaa |
1b4f_A_14 | 1b4f | A | 14 | 30 | VDEWLEAIKMGQYKESF | HHHHHHHTT-GGGHHHH | aaaaaaaavaaaaaaaa |
1fqi_A_307 | 1fqi | A | 313 | 329 | FQHFLRKEFSGENLGFW | HHHHHHHTT-THHHHHH | aaaaaaaavaaaaaaaa |
1j79_A_274 | 1j79 | A | 278 | 294 | YATVFEEMNALQHFEAF | HHHHHHHTT-GGGHHHH | aaaaaaaalaaaaaaaa |
1m7v_A_1 | 1m7v | A | 11 | 27 | IAECYQELGKEEEVKDR | HHHHHHHHT-GGGHHHH | aaaaaaaavaaaaaaaa |
1n1j_A_113 | 1n1j | A | 116 | 132 | ILFAMSTLGFDSYVEPL | HHHHHHHTT-GGGHHHH | aaaaaaaagaaaaaaaa |
1pq1_A_137 | 1pq1 | A | 150 | 166 | LCVESVDKEMQVLVSRI | HHHHHHHTT-TTHHHHH | aaaaaaaavaaaaaaaa |
1pvy_A_116 | 1pvy | A | 125 | 141 | KLAELVKEGRFNDFGKE | HHHHHHHTT-GGGHHHH | aaaaaaaalaaaaaaaa |
1qlv_A_38 | 1qlv | A | 42 | 58 | ADYYFRVTKSEHMVDLK | HHHHHHHTT-TT-HHHH | aaaaaaaalaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | K - 308 |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | S - 312 |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | F - 313 |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | L - 317 |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | N - 325 |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | L - 326 |
1fqi_A_307 | 1fqi | A | MSESELENOMETHIONINE | W - 329 |
Clusters included in this Subclass |
CLUSTER: HH.5.154 |
CLUSTER: HH.5.156 |
CLUSTER: HH.6.252 |
CLUSTER: HH.6.82 |