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PDB code:

Information on SUBCLASS 2.1.3

Subclass Accession number: 4503 Subclass: 2.1.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 28 Average sequence ID (%) : 11.1 +/- 13.6 Average RMSD (Å) : 0.639 +/- 0.217 Consensus geometry d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a41_*_288	1a41	-	289	300	LDVVSKTTFDEF	HHHHTT--HHHH	aaaaaaxxaaaa
1a4s_A_57	1a4s	A	71	82	YLKWSKMAGIER	HHHHTTS-HHHH	aaaaaaxxaaaa
1aa7_A_109	1aa7	A	113	124	KEISLSYSAGAL	HHHHTTS-HHHH	aaaaaabxaaaa
1b3u_A_101	1b3u	A	112	123	RAISHEHSPSDL	HHHHTTS-HHHH	aaaaaaxxaaaa
1cb6_A_1316	1cb6	A	1327	1338	AIQNLRKSEEEV	HHHHTTS-HHHH	aaaaaaxxaaaa
1dmt_A_348	1dmt	A	355	366	KPILTKYSARDL	HHHHTTS-HHHH	aaaaaabxaaaa
1eex_A_98	1eex	A	102	113	VPLTTAMTPAKI	HHHHTTS-HHHH	aaaaaaxxaaaa
1eex_G_99	1eex	G	108	119	AAELTAVPDDRI	HHHHTTS-HHHH	aaaaaaxxaaaa
1fwx_A_61	1fwx	A	65	76	RIHERTMSERTK	HHHHTT--HHHH	aaaaaapxaaaa
1g71_A_202	1g71	A	211	222	GYFILRVNVPHL	HHHHTT--HHHH	aaaaaapbaaaa
1i2t_A_1029	1i2t	A	1033	1044	TGMLLELSPAQL	HHHHTTS-HHHH	aaaaaaxxaaaa
1iex_A_12	1iex	A	17	28	ADLLGRMTLAEK	HHHHTT--HHHH	aaaaaaxxaaaa
1j1n_A_393	1j1n	A	394	405	DYERQWTTPEAQ	HHHHTT--HHHH	aaaaaaxxaaaa
1jm6_A_1038	1jm6	A	1057	1068	MKEINLLPDRVL	HHHHTTS-HHHH	aaaaaaxpaaaa
1m4z_A_189	1m4z	A	193	204	KAYIKKVEPREA	HHHHTTS-HHHH	aaaaaaxxaaaa
1nlf_A_80	1nlf	A	88	99	HALGAHLSAEER	HHHHTTS-HHHH	aaaaaabxaaaa
1o20_A_3	1o20	A	15	26	WDVLRNATTREK	HHHHTT--HHHH	aaaaaaxxaaaa
1p1m_A_80	1p1m	A	81	92	LPIEDRLTEKMA	HHHHTT--HHHH	aaaaaaxxaaaa
1pmq_A_284	1pmq	A	284	295	PEFMKKLQPTVR	HHHHHTS-HHHH	aaaaaaxpaaaa
1q0s_A_53	1q0s	A	59	70	YKRLINVSWDDV	HHHHTT--HHHH	aaaaaabbaaaa
1qb2_A_365	1qb2	A	376	387	MTIMDSMNDQEL	HHHHTTS-HHHH	aaaaaaxxaaaa
1qc7_A_246	1qc7	A	250	261	QLVLREVDTRDL	HHHHTSS-HHHH	aaaaaabxaaaa
1qgr_A_573	1qgr	A	589	600	QNVLRKVQHQDA	HHHHTTS-HHHH	aaaaaaxxaaaa
1qr0_A_14	1qr0	A	18	29	ERFMTFISPEKR	HHHHTTS-HHHH	aaaaaaxxaaaa
1rp3_A_164	1rp3	A	179	190	KEAVSKLPEREK	HHHHTTS-HHHH	aaaaaabxaaaa
1utg_*_32	1utg	-	42	53	KKVLDSLPQTTR	HHHHTTS-HHHH	aaaaaaxwaaaa
1uzb_A_73	1uzb	A	87	98	FKTWKDWPQEDR	HHHHTTS-HHHH	aaaaaaxxaaaa
1v33_A_202	1v33	A	211	222	GYFILRIKLPHL	HHHHTT--HHHH	aaaaaaxbaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1j1n_A_393	1j1n	A	MAW4-DEOXY-D-MANNURONIC ACID	Y - 395
1j1n_A_393	1j1n	A	MAVD-MANNURONIC ACID	Y - 395
1j1n_A_393	1j1n	A	MAW4-DEOXY-D-MANNURONIC ACID	E - 396
1j1n_A_393	1j1n	A	MAW4-DEOXY-D-MANNURONIC ACID	W - 399
1o20_A_3	1o20	A	MSESELENOMETHIONINE	L - 4
1o20_A_3	1o20	A	MSESELENOMETHIONINE	A - 34
1o20_A_3	1o20	A	MSESELENOMETHIONINE	L - 37
1p1m_A_80	1p1m	A	METMETHIONINE	L - 81
1p1m_A_80	1p1m	A	METMETHIONINE	E - 84
1q0s_A_53	1q0s	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	I - 55
1qr0_A_14	1qr0	A	COACOENZYME A	K - 28
1qr0_A_14	1qr0	A	COACOENZYME A	K - 31
1uzb_A_73	1uzb	A	MRD(4R)-2-METHYLPENTANE-2,4-DIOL	K - 91
1uzb_A_73	1uzb	A	MRD(4R)-2-METHYLPENTANE-2,4-DIOL	D - 92

Clusters included in this Subclass

CLUSTER: HH.3.28

CLUSTER: HH.4.64

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