Logo
Information on SUBCLASS 2.1.4
Subclass Accession number: 4504
Subclass: 2.1.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 11.7 +/- 14.6
Average RMSD (Å) : 0.814 +/- 0.191

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXhpXX
(φψ)-conformation: aappaa
Pattern: [adekqrt][aegknrs]xxx[aeknqrt][filmvy][dehknpst][acdgpv]xx[acilmvy]x
Conservation:0.0620.547-0.749-0.935-0.6410.4512.2081.211-0.810-0.813-0.1750.795-1.152
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bjt_*_11251bjt   -11431155LENLLKLSAKDIWHHHHTS-HHHHHHaaaaaaxxaaaaa
1bou_B_2211bou   B221233PEELSKMPHIQYLHHHHTT--HHHHHaaaaaapxaaaaa
1cno_A_571cno   A6173QGQATALSDADIAHHHHTT--HHHHHaaaaaaxxaaaaa
1f8r_A_3751f8r   A378390ANFFQALDFKDCAHHTTTTS-HHHHHaaaaaaxxaaaaa
1g08_B_51g08   B1224TAFWGKVKVDEVGHHHHTT--HHHHHaaaaaaxxaaaaa
1g5a_A_41g5a   A921TRILDIYTPEQRAHHHGGGS-HHHHHaaaaaaxxaaaaa
1gz3_A_4881gz3   A496508KALTSQLTDEELAHHHHTT--HHHHHaaaaaaxbaaaaa
1h5z_A_1551h5z   A155167KKFRDQLDGRFAKHHHHTT--HHHHHaaaaaabbaaaaa
1hnn_A_231hnn   A2436ASAYQRFEPRAYLHHHHTTB-HHHHHaaaaaapbaaaaa
1hzd_A_2661hzd   A275287AREFLPQGPVAMRHHTTTTS-HHHHHaaaaaaxpaaaaa
1i58_A_4711i58   A471483ESKAATLSDQEILHHHHTT--HHHHHaaaaaaxxaaaaa
1iwp_A_741iwp   A7789TEQAMRLEAVEIAHHHHTTS-HHHHHaaaaaaxxaaaaa
1iwp_G_671iwp   G7688AAELIAIPDERILHHTTTTS-HHHHHaaaaaaxwaaaaa
1jks_A_2381jks   A238250DEYFSNTSALAKDHHHHTTS-HHHHHaaaaaaxxaaaaa
1kas_*_641kas   -6476RKEQRKMDAFIQYHHHHTTS-HHHHHaaaaaabxaaaaa
1kic_A_991kic   A109121KAENEKYEGQQLLHHHHHT-BHHHHHaaaaaaxbaaaaa
1nqk_A_2361nqk   A244256ERLISHLDDETIAHHHTTTS-HHHHHaaaaaaxxaaaaa
1qpw_B_51qpw   B1224LGLWGKVNVDEVGHHHHTTS-HHHHHaaaaaaxxaaaaa
1r6t_A_4271r6t   A446458QARRKEVTDEIVKHHHHTT--HHHHHaaaaaaxxaaaaa
1rhc_A_2621rhc   A266278QLHANLVHCDTIKHHHHTTS-HHHHHaaaaaaxxaaaaa
1rkg_A_4041rkg   A404416PENSMKLTPLVLEHHHHTTS-HHHHHaaaaaaxbaaaaa
1spg_B_51spg   B1224KALWGKIDVGEIGHHHHTT--HHHHHaaaaaapbaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cno_A_571cno   A     HECHEME C A - 57
1cno_A_571cno   A     HECHEME C V - 59
1cno_A_571cno   A     HECHEME C M - 60
1cno_A_571cno   A     HECHEME C Q - 63
1cno_A_571cno   A     HECHEME C L - 67
1cno_A_571cno   A     HECHEME C L - 75
1cno_A_571cno   A     HECHEME C Y - 79
1g08_B_51g08   B     CMOCARBON MONOXIDE L - 28
1g08_B_51g08   B     HEMPROTOPORPHYRIN IX CONTAINING FE L - 31
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 23
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 24
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 27
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 30
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 35
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE Y - 35
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE N - 38
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE N - 39
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 40
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE Y - 40
1kic_A_991kic   A     NINICKEL (II) ION K - 109
1kic_A_991kic   A     NOSINOSINE K - 109
1kic_A_991kic   A     NOSINOSINE A - 110
1kic_A_991kic   A     NINICKEL (II) ION E - 113
1kic_A_991kic   A     NOSINOSINE E - 113
1qpw_B_51qpw   B     O2OXYGEN MOLECULE L - 28
1r6t_A_4271r6t   A     MSESELENOMETHIONINE T - 427
1r6t_A_4271r6t   A     MSESELENOMETHIONINE E - 429
1r6t_A_4271r6t   A     MSESELENOMETHIONINE L - 430
1r6t_A_4271r6t   A     MSESELENOMETHIONINE A - 433
1r6t_A_4271r6t   A     MSESELENOMETHIONINE I - 456
1r6t_A_4271r6t   A     MSESELENOMETHIONINE V - 457
1r6t_A_4271r6t   A     MSESELENOMETHIONINE K - 458
1r6t_A_4271r6t   A     MSESELENOMETHIONINE E - 459

Clusters included in this Subclass
CLUSTER: HH.3.36
CLUSTER: HH.4.297
CLUSTER: HH.5.29
CLUSTER: HH.6.134
CLUSTER: HH.7.119