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Information on SUBCLASS 2.1.27
Subclass Accession number: 4527
Subclass: 2.1.27 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 37.2 +/- 28.8
Average RMSD (Å) : 0.500 +/- 0.337

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: hXKhXX
(φψ)-conformation: aappaa
Pattern: [ey][HNST][DQ][KR][il]x[FV][CL][AQR][nv][CLM][IMV][HKT][ACL][AC][D][IL][NS][AGN][IP][AT][K][PSV][lw][DEPQ][IL][HQY][qr][KQR][LW][AT][DE][gr][IV][AMV][ENT][E][F][FY]
Conservation:-1.114-0.6730.4410.783-1.240-0.738-0.328-0.074-0.595-1.130-0.2950.079-0.862-0.6090.2402.3740.4330.291-0.739-0.2950.1141.706-0.910-1.215-0.5900.4220.012-1.0170.0651.1070.0810.864-1.6840.730-0.656-0.6021.7062.3741.547
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0j_A_3771f0j   A377415YTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFHHHHHHHHHHHHHHHHT-GGGS-HHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaxpaaaaaaaaaaaaaaaa
1oyn_A_3031oyn   A303341YSDRIQVLQNMVHCADLSNPTKPLQLYRQWTDRIMEEFFHHHHHHHHHHHHHHHHT-GGGS-HHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaxwaaaaaaaaaaaaaaaa
1rkp_A_7491rkp   A749787PHQKELFLAMLMTACDLSAITKPWPIQQRLAELVATEFFHHHHHHHHHHHHHHHHTGGGGS-HHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaxwaaaaaaaaaaaaaaaa
1so2_A_9221so2   A922960ENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYHHHHHHHHHHHHHHHHT-GGGS-HHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaabpaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f0j_A_3771f0j   A     ZNZINC ION D - 392
1f0j_A_3771f0j   A     MGMAGNESIUM ION D - 392
1f0j_A_3771f0j   A     ARSARSENIC D - 392
1f0j_A_3771f0j   A     ARSARSENIC L - 393
1f0j_A_3771f0j   A     ARSARSENIC I - 410
1f0j_A_3771f0j   A     ARSARSENIC F - 414
1oyn_A_3031oyn   A     ZNZINC ION D - 318
1oyn_A_3031oyn   A     ROLROLIPRAM D - 318
1oyn_A_3031oyn   A     ROLROLIPRAM L - 319
1oyn_A_3031oyn   A     ROLROLIPRAM N - 321
1oyn_A_3031oyn   A     ROLROLIPRAM P - 322
1oyn_A_3031oyn   A     ROLROLIPRAM Y - 329
1oyn_A_3031oyn   A     ROLROLIPRAM W - 332
1oyn_A_3031oyn   A     ROLROLIPRAM T - 333
1oyn_A_3031oyn   A     ROLROLIPRAM I - 336
1oyn_A_3031oyn   A     ROLROLIPRAM M - 337
1oyn_A_3031oyn   A     ROLROLIPRAM F - 340
1rkp_A_7491rkp   A     ZNZINC ION D - 764
1rkp_A_7491rkp   A     MGMAGNESIUM ION D - 764
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE D - 764
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE L - 765
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE S - 766
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE A - 767
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE I - 768
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE Q - 775
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE L - 778
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE A - 779
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE V - 782
1rkp_A_7491rkp   A     IBM3-ISOBUTYL-1-METHYLXANTHINE F - 786
1so2_A_9221so2   A     MGMAGNESIUM ION D - 937
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE D - 937
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE I - 938
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE N - 939
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE G - 940
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE P - 941
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL R - 945
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE L - 947
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE H - 948
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL L - 949
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE L - 949
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL K - 950
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE W - 951
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL T - 952
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE T - 952
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL E - 953
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE I - 955
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL V - 956
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL N - 957
1so2_A_9221so2   A     6666-(4-{[2-(3-IODOBENZYL)-3-OXOCYCLOHEX-1-EN-1-YL]AMINO} PHENYL)-5-METHYL-4,5-DIHYDROPYRIDAZIN-3(2H)-ONE F - 959
1so2_A_9221so2   A     HG91-DEOXY-1-[(2-HYDROXYETHYL)(NONANOYL)AMINO]HEXITOL Y - 960
1so2_A_9221so2   A     MGMAGNESIUM ION D - 964
1so2_A_9221so2   A     MGMAGNESIUM ION A - 967
1so2_A_9221so2   A     MGMAGNESIUM ION N - 968

Clusters included in this Subclass
CLUSTER: HH.6.142