Information on SUBCLASS 2.1.47 |
Subclass Accession number: 4547
Subclass: 2.1.47 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 26.2 +/- 17.7 Average RMSD (Å) : 0.567 +/- 0.252 Consensus geometry
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Consensus Sequence: | XXLpXX |
(φψ)-conformation: | aappaa |
Pattern: | [GVY] | [ANR] | [EKL] | [AI] | [KLT] | [DP] | [FHL] | [L] | [DS] | [AE] | [ADR] | [AT] | [R] | x |
Conservation: | -1.091 | -0.617 | -0.854 | -0.110 | -0.854 | 0.885 | -0.538 | 1.516 | 0.393 | 0.129 | -0.933 | 0.462 | 2.226 | -0.617 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ds1_A_177 | 1ds1 | A | 177 | 190 | VRKALPLLDERTRA | HHHHGGGS-HHHHH | aaaaaaaxxaaaaa |
1knc_A_49 | 1knc | A | 56 | 69 | GAEATDHLSAAARH | HHHHTTT--HHHHH | aaaaaaabxaaaaa |
1o6u_A_198 | 1o6u | A | 202 | 215 | YNLIKPFLSEDTRK | HHHHGGGS-HHHHH | aaaaaaaxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o6u_A_198 | 1o6u | A | MSESELENOMETHIONINE | F - 198 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | F - 198 |
1o6u_A_198 | 1o6u | A | MSESELENOMETHIONINE | P - 199 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | A - 201 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | Y - 202 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | L - 204 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | I - 205 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | L - 209 |
1o6u_A_198 | 1o6u | A | PLMPALMITIC ACID | T - 213 |
1o6u_A_198 | 1o6u | A | MSESELENOMETHIONINE | R - 214 |
1o6u_A_198 | 1o6u | A | MSESELENOMETHIONINE | K - 215 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o6u_A_198 | 1o6u | A | AC1PLM BINDING SITE FOR CHAIN A | A - 201 |
Clusters included in this Subclass |
CLUSTER: HH.5.218 |