Information on SUBCLASS 2.1.50 |
Subclass Accession number: 4550
Subclass: 2.1.50 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>50 %) 3.1.1 (>50 %) 3.1.1.3 GO : GO:0016298 (>50 %) GO:0016788 (>50 %) GO:0016789 (>50 %) SCOP : 53473 (>50 %) 53474 (>50 %) 53577 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 32.1 +/- 30.4 Average RMSD (Å) : 0.700 +/- 0.265 Consensus geometry
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Consensus Sequence: | XpXXpp |
(φψ)-conformation: | aappaa |
Pattern: | [KT] | [G] | [FG] | x | [EKR] | [ALT] | x | [QY] | [NST] | [DQ] | [AQ] | x | x | x | [IL] | [KR] | x | [GV] | [CG] | [AL] | [E] | [V] | [AV] | [LY] | [FLV] | x | [EMQ] |
Conservation: | -0.073 | 3.006 | -0.445 | -0.316 | 0.154 | -0.883 | -1.315 | 0.414 | -0.019 | 0.462 | -0.316 | -0.850 | -0.607 | -0.748 | 0.683 | 1.078 | -0.796 | -0.931 | 0.008 | -0.467 | 2.228 | 1.450 | -0.083 | 0.262 | -0.451 | -1.082 | -0.364 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpl_*_107 | 1gpl | - | 107 | 133 | KGGSKAQYSQASQNIRVVGAEVAYLVQ | HHHHTS-HHHHHHHHHHHHHHHHHHHH | aaaaaxxaaaaaaaaaaaaaaaaaaaa |
1lpb_B_107 | 1lpb | B | 107 | 133 | KGGSRTGYTQASQNIRIVGAEVAYFVE | HHHHSS-HHHHHHHHHHHHHHHHHHHH | aaaaabxaaaaaaaaaaaaaaaaaaaa |
1nq7_A_281 | 1nq7 | A | 281 | 307 | TGFMELCQNDQILLLKSGCLEVVLVRM | HHHHTS-HHHHHHHHHHHHHHHHHHHH | aaaaaxxaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.4.339 |