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Information on SUBCLASS 2.2.6
Subclass Accession number: 4567
Subclass: 2.2.6 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 18.1 +/- 19.6
Average RMSD (Å) : 0.567 +/- 0.214

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hphpXX
(φψ)-conformation: aalpaa
Pattern: [afglmtv]xxxx[aflmv][kst][agqr][DEHKNS]x[degknqst][afglpy][afilv][adekqt]
Conservation:-0.631-0.884-0.467-0.070-0.961-0.1721.4811.8751.666-1.158-0.199-0.756-0.1540.431
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b2v_A_1311b2v   A135148VVYGLMSGDTGALEHHHHHHTT--HHHHaaaaaaavbaaaaa
1col_A_1101col   A121134SIEGYETGNWGPLMHHHHHHH---HHHHaaaaaaavbaaaaa
1dl2_A_4351dl2   A441454MFMYHLSHDHKYREHHHHHHH--THHHHaaaaaaavxaaaaa
1fo3_A_4021fo3   A406419RELSRLTGDKKFQEHHHHHHH--THHHHaaaaaaavxaaaaa
1fo3_A_5991fo3   A605618FYLYRVTGDRKYQDHHHHHHH--THHHHaaaaaaavxaaaaa
1g5a_A_3511g5a   A357370LWNTLATREVNLLHHHHHHHH---HHHHaaaaaaavbaaaaa
1g9g_A_541g9g   A6578AMHGRFSGDFTGFDHHHHHHHS--HHHHaaaaaaavbaaaaa
1hcu_A_1821hcu   A186199TRLSDLTGNPQYAQHHHHHHHS-THHHHaaaaaaavxaaaaa
1k9x_A_4441k9x   A444457FEEKVAKAEFDPIKHHHHHHHT--HHHHaaaaaaavxaaaaa
1kre_A_2031kre   A207220TRLSDLTGDEEYAKHHHHHHHS-THHHHaaaaaaavxaaaaa
1l1y_A_861l1y   A97110AMYGNLTGNWSGVEHHHHHHHS--HHHHaaaaaaavxaaaaa
1n93_X_1301n93   X143156LLIGVVIGSSSKIKHHHHHHHT-SHHHHaaaaaaavbaaaaa
1nc5_A_1431nc5   A153166LKYANLKQETELFDHHHHHHHT-THHHHaaaaaaalbaaaaa
1nxc_A_3561nxc   A360373MHLSHLSGDPVFAEHHHHHHH--THHHHaaaaaaavxaaaaa
1qaz_A_801qaz   A98111GNLYVATGKPVYATHHHHHHH--THHHHaaaaaaavxwaaaa
1r7a_A_2551r7a   A259272LLHALSTGHVEPVAHHHHHHH---HHHHaaaaaaavxaaaaa
1rh1_A_4201rh1   A431444SIEGYQTGNWGPLMHHHHHSSS--HHHHaaxgaaavbaaaaa
1ut9_A_6801ut9   A692705GYAYDFTGDSKYLDHHHHHHH--THHHHaaaaaaavxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b2v_A_1311b2v   A     CACALCIUM ION H - 133
1b2v_A_1311b2v   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 133
1b2v_A_1311b2v   A     CACALCIUM ION V - 136
1b2v_A_1311b2v   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 136
1b2v_A_1311b2v   A     CACALCIUM ION Y - 137
1b2v_A_1311b2v   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 137
1b2v_A_1311b2v   A     CACALCIUM ION M - 140
1b2v_A_1311b2v   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 140
1dl2_A_4351dl2   A     CACALCIUM ION E - 435
1dl2_A_4351dl2   A     GOLGLYCEROL E - 435
1dl2_A_4351dl2   A     CACALCIUM ION E - 438
1fo3_A_5991fo3   A     KIFKIFUNENSINE E - 599
1fo3_A_5991fo3   A     CACALCIUM ION E - 599
1fo3_A_5991fo3   A     KIFKIFUNENSINE E - 602
1fo3_A_5991fo3   A     CACALCIUM ION E - 602
1g9g_A_541g9g   A     MGMAGNESIUM ION E - 55
1l1y_A_861l1y   A     BGCBETA-D-GLUCOSE E - 87

Clusters included in this Subclass
CLUSTER: HH.2.66
CLUSTER: HH.4.34