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Information on SUBCLASS 2.3.7
Subclass Accession number: 4585
Subclass: 2.3.7 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 43.7 +/- 31.9
Average RMSD (Å) : 0.425 +/- 0.116

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XcFXhX
(φψ)-conformation: aabpaa
Pattern: [FL][EK][FIL][IL][CS][DEH][acns][IL][ILV]x[TV][IL][AQ]x[HK][FHL][P][ADGNST][DEN][F][GNT][AP][ADES][ASV][HQ][AGI][ANS][LMV][DKNS][K][AFV][L][AES]x[fv][RS][ANT][ADV]
Conservation:0.3320.561-0.0960.5490.1460.225-1.2120.5590.297-1.3890.1230.675-0.120-1.1570.553-0.4903.125-0.9320.5172.478-0.5310.223-0.660-0.6820.871-0.762-0.3960.171-0.4611.831-0.7661.184-0.479-1.208-1.176-0.283-0.494-1.125
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ch4_A_1001ch4   A103140FKLLSHCLLVTLAAHLPAEFTPAVHASLDKVLASVSTVHHHHHHHHHHHHHHHSTTT--HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa
1emy_*_1011emy   -104141LEFISDAIIHVLQSKHPAEFGADAQGAMKKALELFRNDHHHHHHHHHHHHHHHSTTTS-HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaabxaaaaaaaaaaaaaaaaa
1hds_A_981hds   A98135FKLLSHSLLVTLASHLPTNFTPAVHANLNKFLANDSTVHHHHHHHHHHHHHHH-TTT--HHHHHHHHHHHHHHHHHaaaaaaaaaaGaaaaawaabpaaaaaaaaaaaaaaaaa
1iwh_A_951iwh   A98135FKLLSHCLLSTLAVHLPNDFTPAVHASLDKFLSSVSTVHHHHHHHHHHHHHHH-TTT--HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa
1lht_*_1011lht   -104141LEFICEIIVKVIAEKHPSDFGADSQAAMKKALELFRNDHHHHHHHHHHHHHHH-TTT--HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaabxaaaaaaaaaaaaaaaaa
1mwc_A_1011mwc   A104141LEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDHHHHHHHHHHHHHHH-TTTS-HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaabxaaaaaaaaaaaaaaaaa
1out_A_971out   A99136FKILSHNILVTLAIHFPSDFTPEVHIAVDKFLAAVSAAHHHHHHHHHHHHHHH-TTT--HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa
1qpw_A_951qpw   A98135FKLLSHCLLVTLAAHHPDDFNPSVHASLDKFLANVSTVHHHHHHHHHHHHHHHSGGG--HHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaxxaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 102
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 103
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 106
1ch4_A_1001ch4   A     CMOCARBON MONOXIDE L - 106
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 107
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 134
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 137
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 138
1ch4_A_1001ch4   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 141
1emy_*_1011emy   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 103
1emy_*_1011emy   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 104
1emy_*_1011emy   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 107
1emy_*_1011emy   *     CYNCYANIDE ION I - 107
1emy_*_1011emy   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 111
1emy_*_1011emy   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 138
1hds_A_981hds   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 98
1hds_A_981hds   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 101
1hds_A_981hds   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 102
1hds_A_981hds   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 129
1hds_A_981hds   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 132
1hds_A_981hds   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 133
1iwh_A_951iwh   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 97
1iwh_A_951iwh   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 99
1iwh_A_951iwh   A     CMOCARBON MONOXIDE L - 101
1iwh_A_951iwh   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 105
1iwh_A_951iwh   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 132
1iwh_A_951iwh   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 136
1lht_*_1011lht   *     HEMPROTOPORPHYRIN IX CONTAINING FE C - 108
1lht_*_1011lht   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 142
1mwc_A_1011mwc   A     CMOCARBON MONOXIDE I - 107
1mwc_A_1011mwc   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 108
1mwc_A_1011mwc   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 135
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 98
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 99
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 102
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 103
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 133
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 134
1out_A_971out   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 137

Clusters included in this Subclass
CLUSTER: HH.7.12