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Information on SUBCLASS 2.4.10
Subclass Accession number: 4612
Subclass: 2.4.10 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 7.9 +/- 12.5
Average RMSD (Å) : 0.567 +/- 0.321

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXXXcp
(φψ)-conformation: aapbea
Pattern: [FL]xx[DEY]x[AFK]xxx[KMT][GN][DKR]x[EQR]xx[IY]x[AR][GLM]x
Conservation:1.327-0.815-0.0940.147-0.815-0.935-0.214-0.6950.208-0.2142.2380.387-1.1761.229-0.815-0.9352.073-0.6950.701-0.695-0.214
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fth_A_10341fth   A10351055LEMERFTSLKGRRQIEYLAGRHHHHHHHH--HHHHHHHHHHHaaaaaaaaxbeaaaaaaaaaa
1g5n_A_631g5n   A6383LVNDMKSELTGKFEKLIVALMHHHHHHHH--HHHHHHHHHHHaaaaaaaaxbeaaaaaaaaaa
1m3y_A_1101m3y   A113133FRTYDALFRMNDDRYNYRRMTHHHHHHHH--HHHHHHHHHHHaaaaaaaabbeaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fth_A_10341fth   A     A3PADENOSINE-3'-5'-DIPHOSPHATE E - 1060
1fth_A_10341fth   A     A3PADENOSINE-3'-5'-DIPHOSPHATE S - 1063
1fth_A_10341fth   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 1064
1fth_A_10341fth   A     A3PADENOSINE-3'-5'-DIPHOSPHATE A - 1065
1fth_A_10341fth   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 1066
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE N - 65
1g5n_A_631g5n   A     IDU1,4-DIDEOXY-O2-SULFO-GLUCURONIC ACID N - 65
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE D - 66
1g5n_A_631g5n   A     IDU1,4-DIDEOXY-O2-SULFO-GLUCURONIC ACID D - 66
1g5n_A_631g5n   A     CACALCIUM ION M - 67
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE K - 68
1g5n_A_631g5n   A     CACALCIUM ION K - 68
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE S - 69
1g5n_A_631g5n   A     IDU1,4-DIDEOXY-O2-SULFO-GLUCURONIC ACID S - 69
1g5n_A_631g5n   A     CACALCIUM ION S - 69
1g5n_A_631g5n   A     UAP1,4-DIDEOXY-5-DEHYDRO-O2-SULFO-GLUCURONIC ACID E - 70
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE E - 70
1g5n_A_631g5n   A     IDU1,4-DIDEOXY-O2-SULFO-GLUCURONIC ACID E - 70
1g5n_A_631g5n   A     CACALCIUM ION E - 70
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE L - 71
1g5n_A_631g5n   A     CACALCIUM ION L - 71
1g5n_A_631g5n   A     CACALCIUM ION T - 72
1g5n_A_631g5n   A     CACALCIUM ION G - 73
1g5n_A_631g5n   A     SGNN,O6-DISULFO-GLUCOSAMINE E - 76
1g5n_A_631g5n   A     CACALCIUM ION E - 76

Clusters included in this Subclass
CLUSTER: HH.3.286