Information on SUBCLASS 2.8.4 |
Subclass Accession number: 4634
Subclass: 2.8.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.2 +/- 14.6 Average RMSD (Å) : 0.700 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXXXGp |
(φψ)-conformation: | aabbea |
Pattern: | [GIL] | x | [EH] | [DR] | [ILV] | [AT] | x | [HMV] | x | [EGT] | [G] | [DES] | x | x | x | x | [LM] | x | x | [FL] | [FV] | [KST] |
Conservation: | -1.028 | -1.435 | 1.076 | 0.258 | 0.760 | 0.486 | -0.866 | -0.459 | -0.216 | -0.703 | 3.198 | 0.353 | -0.459 | -0.459 | -0.541 | -0.159 | 1.157 | -0.785 | -0.947 | 0.579 | 0.244 | -0.053 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1n00_A_138 | 1n00 | A | 138 | 159 | LEEDVAHHTTGDFHKLLLPLVS | HHHHHHHH--HHHHHHHHHHHH | aaaaaaaabbeaaaaaaaaaaa |
1n7o_A_471 | 1n7o | A | 481 | 502 | GIHRIADMSEGETKQRLQSLVK | HHHHHHHHS-HHHHHHHHHHHH | aaaaaaaaxbeaaaaaaaaaaa |
1un8_A_413 | 1un8 | A | 420 | 441 | IGERLTVVMGGSSGVLMSIFFT | HHHHHHHHS-HHHHHHHHHHHH | aaaaaaaabxeaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1un8_A_413 | 1un8 | A | AC1MYY BINDING SITE FOR CHAIN A | L - 413 |
1un8_A_413 | 1un8 | A | AC1MYY BINDING SITE FOR CHAIN A | I - 420 |
1un8_A_413 | 1un8 | A | AC1MYY BINDING SITE FOR CHAIN A | M - 436 |
1un8_A_413 | 1un8 | A | AC1MYY BINDING SITE FOR CHAIN A | F - 440 |
Clusters included in this Subclass |
CLUSTER: HH.2.248 |