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Information on SUBCLASS 3.1.24
Subclass Accession number: 4670
Subclass: 3.1.24 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004601 (>75 %)  GO:0016684 (>75 %)  GO:0016688 (>75 %)  
SCOP : 48112 (>75 %)  48113 (>75 %)  48114 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 95.7 +/- 0.0
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: AMGLpDQ
(φψ)-conformation: aalppaa
Pattern: [S][D][H][L][R][D][V][F][G][K][A][M][G][L][ST][D][Q][D][I][V][A][L][S]
Conservation:-0.7620.9272.616-0.7620.0830.927-0.7620.9270.9270.083-0.7620.0830.927-0.762-1.8180.9270.0830.927-0.762-0.762-0.762-0.762-0.762
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1apx_A_1381apx   A138160SDHLRDVFGKAMGLSDQDIVALSHHHHHHHHTTTS---HHHHHHHHaaaaaaaaaaaavxxaaaaaaaa
1oaf_A_1381oaf   A138160SDHLRDVFGKAMGLTDQDIVALSHHHHHHHHTTTT---HHHHHHHHaaaaaaaaaaaavxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1apx_A_1381apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 141
1apx_A_1381apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 145
1apx_A_1381apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 156
1apx_A_1381apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 158
1apx_A_1381apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 159
1apx_A_1381apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 160
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oaf_A_1381oaf   A AC1HEM BINDING SITE FOR CHAIN AF - 145
1oaf_A_1381oaf   A AC1HEM BINDING SITE FOR CHAIN AL - 159

Clusters included in this Subclass
CLUSTER: HH.6.202