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Information on SUBCLASS 3.3.9
Subclass Accession number: 4688
Subclass: 3.3.9 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0016829 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 11.1 +/- 11.9
Average RMSD (Å) : 0.933 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhXXpXp
(φψ)-conformation: aapapaa
Pattern: [AS][AKL][IL][KLM][AL]x[DKP][DS]x[HQY][AEK][AR]x[ANR]x[HV]xx
Conservation:1.392-1.0081.879-0.1230.355-0.249-0.1231.814-1.5141.141-0.1230.487-0.502-0.502-0.755-0.152-0.882-1.134
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hn0_A_4501hn0   A455472ALLLLEPDDQKRINLVNTHHHHT-SSHHHHHHHHHHaaaaapaxaaaaaaaaaa
1mhy_G_881mhy   G97114AKIKAAKSKYEAEAIHIEHHHHT--SHHHHHHHHHHaaaaaxabaaaaaaaaaa
1pii_*_2371pii   -237254SALMAHDDLHAAVRRVLLHHHHT-S-HHHHHHHHHHaaaaabaxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1pii_*_2371pii   *     PO4PHOSPHATE ION S - 237
1pii_*_2371pii   *     PO4PHOSPHATE ION A - 238

Clusters included in this Subclass
CLUSTER: HH.5.326