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Information on SUBCLASS 3.11.2
Subclass Accession number: 4739
Subclass: 3.11.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 25.0 +/- 33.3
Average RMSD (Å) : 1.100 +/- 0.082

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXcpXX
(φψ)-conformation: aaplbaa
Pattern: [ADE]x[EL][NW][AQ]xxx[GN][NT][MQ][STV][AGK][FHL]
Conservation:-0.240-0.683-0.9070.5290.234-0.254-1.070-0.7881.7112.0051.221-0.479-0.680-0.598
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1llp_*_2481llp   -248261ACEWQSFVGNQSKLHHHHHTTTT-HHHHaaaaaaaxvbaaaa
1qpa_A_2481qpa   A248261ACEWQSFVNNQTKLHHHHHTTTT-HHHHaaaaaaapvbaaaa
1vh5_A_91vh5   A1023EALNAMGEGNMVGFHHHHHTTTTSHHHHaaaaaaaxvbaaaa
1vh9_A_91vh9   A1023DELNATSDNTMVAHHHHHHTSTTSHHHHaaaaaaapvbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1llp_*_2481llp   *     NGAN-ACETYL-D-GALACTOSAMINE C - 249
1llp_*_2481llp   *     NGAN-ACETYL-D-GALACTOSAMINE E - 250
1llp_*_2481llp   *     NGAN-ACETYL-D-GALACTOSAMINE Q - 252
1llp_*_2481llp   *     NAGN-ACETYL-D-GLUCOSAMINE S - 253
1llp_*_2481llp   *     NGAN-ACETYL-D-GALACTOSAMINE S - 253
1llp_*_2481llp   *     HYDHYDROXY GROUP F - 254
1llp_*_2481llp   *     NAGN-ACETYL-D-GLUCOSAMINE G - 256
1llp_*_2481llp   *     NAGN-ACETYL-D-GLUCOSAMINE N - 257
1llp_*_2481llp   *     NAGN-ACETYL-D-GLUCOSAMINE S - 259
1llp_*_2481llp   *     NAGN-ACETYL-D-GLUCOSAMINE K - 260
1llp_*_2481llp   *     HYDHYDROXY GROUP L - 261
1llp_*_2481llp   *     HYDHYDROXY GROUP D - 264
1llp_*_2481llp   *     HYDHYDROXY GROUP F - 265
1llp_*_2481llp   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 265
1llp_*_2481llp   *     CACALCIUM ION F - 265
1llp_*_2481llp   *     HYDHYDROXY GROUP Q - 266
1llp_*_2481llp   *     HYDHYDROXY GROUP I - 268
1llp_*_2481llp   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 269
1llp_*_2481llp   *     CACALCIUM ION F - 269
1llp_*_2481llp   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 272
1llp_*_2481llp   *     CACALCIUM ION L - 272
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE E - 250
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE F - 254
1qpa_A_2481qpa   A     CACALCIUM ION F - 254
1qpa_A_2481qpa   A     NAGN-ACETYL-D-GLUCOSAMINE V - 255
1qpa_A_2481qpa   A     NAGN-ACETYL-D-GLUCOSAMINE N - 256
1qpa_A_2481qpa   A     NAGN-ACETYL-D-GLUCOSAMINE T - 259
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE K - 260
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE L - 261
1qpa_A_2481qpa   A     NAGN-ACETYL-D-GLUCOSAMINE E - 263
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE D - 264
1qpa_A_2481qpa   A     CACALCIUM ION D - 264
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE F - 265
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE F - 267
1qpa_A_2481qpa   A     HTRBETA-HYDROXYTRYPTOPHANE I - 268
1qpa_A_2481qpa   A     CACALCIUM ION I - 268

Clusters included in this Subclass
CLUSTER: HH.4.212