Information on SUBCLASS 2.2.4 |
Subclass Accession number: 474
Subclass: 2.2.4 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 46 Average sequence ID (%) : 6.9 +/- 11.3 Average RMSD (Å) : 0.430 +/- 0.221 Consensus geometry
|
Consensus Sequence: | XXXpXX |
(φψ)-conformation: | bbaabb |
Pattern: | x | x | [adegnqst] | x | [dehnqrstwy] | x | x | x |
Conservation: | -0.348 | -0.502 | 2.050 | 0.451 | 0.562 | -0.952 | -0.951 | -0.310 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1v_A_251 | 1a1v | A | 252 | 259 | IRTGVRTI | EE-SS-EE | bbbaabbb |
1c8u_A_74 | 1c8u | A | 82 | 89 | RDGNSFSA | EE-SSEEE | bbbaabbb |
1cb8_A_601 | 1cb8 | A | 604 | 611 | ANTNQLQA | EESSSEEE | bbbaabbb |
1chm_A_329 | 1chm | A | 329 | 334 | .LSHYYG. | .EETTEE. | .bbaabe. |
1d2s_A_75 | 1d2s | A | 80 | 87 | LHNHWAQL | EESSS-EE | bbbaabbb |
1d7p_M_2196 | 1d7p | M | 2196 | 2203 | FTNMFATW | EEETTEEE | xbbaabbx |
1dgw_X_258 | 1dgw | X | 258 | 265 | YSNNYGKL | EE-SSEEE | bbxaabbb |
1ecs_A_27 | 1ecs | A | 30 | 37 | FRDAGWMI | EE-SSEEE | bbbaabbb |
1ei5_A_500 | 1ei5 | A | 505 | 512 | VGCWLARG | EEETTEEE | bbbaabxl |
1ex2_A_100 | 1ex2 | A | 109 | 116 | IQAENHSE | EEETTEEE | bbbaabbb |
1f94_A_46 | 1f94 | A | 46 | 53 | IDTWNVYN | EESSSEEE | bbbaabbb |
1f9y_A_106 | 1f9y | A | 106 | 113 | INTERLTV | EE-SS-EE | bbbaabbb |
1gpj_A_41 | 1gpj | A | 45 | 52 | LQTSNRVE | EEETTEEE | bbbaabbb |
1h54_A_187 | 1h54 | A | 193 | 200 | DQQADRGS | EE-SSEEE | bbbaabbb |
1hn0_A_900 | 1hn0 | A | 904 | 911 | RKDKDVHI | EESSSEEE | bbbaabbb |
1j0m_A_662 | 1j0m | A | 666 | 673 | VNTSGVQS | EESSSEEE | bbbaabbb |
1jce_A_5 | 1jce | A | 9 | 16 | DLGTANTL | EE-SSEEE | bxxaabbb |
1jni_A_51 | 1jni | A | 51 | 56 | .VTKNVN. | .EETTEE. | .bbaabb. |
1jov_A_97 | 1jov | A | 102 | 109 | YISVHKVR | EEETTEEE | bbbaabbb |
1jp4_A_38 | 1jp4 | A | 40 | 47 | KTSATDLQ | EEETTEEE | Fabaabbb |
1k32_A_126 | 1k32 | A | 127 | 133 | KSTGRRM. | EEETTEE. | xbbaabx. |
1k55_A_193 | 1k55 | A | 195 | 202 | EAAPEYLV | EEETTEEE | bbbaabbb |
1luc_A_143 | 1luc | A | 146 | 153 | ADNEHIKF | EESSS-EE | bbbaabbb |
1lur_A_1104 | 1lur | A | 1107 | 1114 | RHAPESVS | EEETTEEE | bbbaabbb |
1mbm_A_100 | 1mbm | A | 105 | 112 | LLSGEVCL | EE-SS-EE | xbbaabbb |
1n6m_A_446 | 1n6m | A | 446 | 451 | .GVPESV. | .EETTEE. | .ebaabx. |
1n7o_A_817 | 1n7o | A | 819 | 826 | ENNETLQS | EESSSEEE | bbbaabbb |
1nbc_A_74 | 1nbc | A | 83 | 90 | SSTNNADT | EEETTEEE | bbbaabab |
1nc7_A_93 | 1nc7 | A | 97 | 104 | DVGKNHYT | EEETTEEE | bbbaabbb |
1nkr_*_173 | 1nkr | - | 179 | 186 | GSFHDSPY | EEETTEEE | bbbaabaa |
1nqk_A_148 | 1nqk | A | 150 | 157 | FNGKHIHV | EE-SS-EE | bbbaaxbb |
1oi2_A_359 | 1oi2 | A | 359 | 366 | VHTPALNW | EESSS-EE | bbbaabbb |
1ou8_A_60 | 1ou8 | A | 63 | 70 | QLTNDFIQ | EE-SSEEE | bbbaabbb |
1pam_A_541 | 1pam | A | 543 | 550 | AWEDTQIQ | EE-SSEEE | bbbaabbb |
1pl3_A_109 | 1pl3 | A | 109 | 116 | TINSTHWK | EE-SSEEE | bbbaabbb |
1pp7_U_110 | 1pp7 | U | 110 | 115 | .FTRNSV. | .EETTEE. | .bbaabb. |
1qft_A_107 | 1qft | A | 114 | 121 | YSDDNCDV | EEETTEEE | bbbaabbb |
1qwr_A_237 | 1qwr | A | 243 | 250 | VQGEYFSV | EE-SS-EE | bbbaabbb |
1r6t_A_84 | 1r6t | A | 84 | 91 | FVDPWTVQ | EESSS-EE | bbbaabbb |
1rhc_A_146 | 1rhc | A | 148 | 155 | FKGDYFTL | EE-SS-EE | bbxaabbb |
1rwh_A_646 | 1rwh | A | 650 | 657 | RNDATAQS | EESSSEEE | bbbaabbb |
1s16_A_1233 | 1s16 | A | 1242 | 1249 | FAGDTEAV | EE-SSEEE | bbbaabbb |
1svb_*_363 | 1svb | - | 363 | 369 | TIENNGG. | EEETTEE. | bbxaabe. |
1uhv_A_360 | 1uhv | A | 363 | 370 | YRDEHMLV | EEETTEEE | bbbaabbb |
1ux6_A_1004 | 1ux6 | A | 1011 | 1018 | YQSSSRFY | EEETTEEE | xabaabbx |
2pva_A_288 | 2pva | A | 291 | 298 | FKLYDNSR | EEETTEEE | bbbaabax |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |