Logo
Information on SUBCLASS 3.17.1
Subclass Accession number: 4749
Subclass: 3.17.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 54.6 +/- 23.4
Average RMSD (Å) : 0.275 +/- 0.050

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XhphDDT
(φψ)-conformation: aalpbaa
Pattern: [ST][D][AL][IV][F][ADE][FL][AG]x[QS][L]x[APS][FL][EN][LM][D][D][AT][E][TV][AG][L][L][QS][A][IV][CL][L]
Conservation:-0.2921.835-1.1020.2031.835-1.171-0.460-0.439-1.837-0.6180.529-1.429-1.130-0.439-0.2810.0351.8351.835-0.4131.182-0.618-0.4600.5290.529-0.6070.5290.203-0.3130.529
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dkf_B_3061dkf   B306334TDLVFAFANQLLPLEMDDAETGLLSAICLHHHHHHHHHHTGGGT--HHHHHHHHHHHHaaaaaaaaaaaaaalxbaaaaaaaaaaaa
1fcy_A_3081fcy   A308336TDLVFAFAGQLLPLEMDDTETGLLSAICLHHHHHHHHHHHGGG---HHHHHHHHHHHHaaaaaaaaaaaaaalxxaaaaaaaaaaaa
1n46_A_3491n46   A350378SDAIFDLGMSLSSFNLDDTEVALLQAVLLHHHHHHHHHHHGGGT--HHHHHHHHHHHHaaaaaaaaaaaaaalpbaaaaaaaaaaaa
1nav_A_2941nav   A296324SDAIFELGKSLSAFNLDDTEVALLQAVLLHHHHHHHHHHHTTTT--HHHHHHHHHHHHaaaaaaaaaaaaaalpbaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dkf_B_3061dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID V - 309
1n46_A_3491n46   A     PFA[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL I - 353
1nav_A_2941nav   A     IH5[4-(4-HYDROXY-3-ISOPROPYLPHENOXY)-3,5-DIMETHYLPHENYL] ACETIC ACID I - 299

Clusters included in this Subclass
CLUSTER: HH.7.68