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Information on SUBCLASS 3.25.2
Subclass Accession number: 4758
Subclass: 3.25.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 8.3 +/- 11.6
Average RMSD (Å) : 0.933 +/- 0.351

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XhcXXhp
(φψ)-conformation: aagbpaa
Pattern: [AIW][AIL][ADQ]x[CGM][GK][FKL][PT][LW][DEY]x[IMV]
Conservation:-1.024-0.129-0.512-0.640-0.8960.995-1.0241.9370.782-0.129-0.6401.278
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jpm_A_971jpm   A111122WAQMCGLPLYQMHHHHTTSBHHHHaaaaavbxaaaa
1l6w_A_291l6w   A3142IIAAGKKPLDVVHHHHH-S-HHHHaaaaagxxaaaa
1p5h_A_1011p5h   A101112ALDRMGFTWEYIHHHHTT--HHHHaaaaagbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jpm_A_971jpm   A     GOLGLYCEROL D - 109
1jpm_A_971jpm   A     GOLGLYCEROL Q - 113
1l6w_A_291l6w   A     GOLGLYCEROL I - 31

Clusters included in this Subclass
CLUSTER: HH.3.276